Rubio A - Search Results

1

Correlation between gene expression and GO semantic similarity.

Sevilla JL, Segura V, Podhorski A, Guruceaga E, Mato JM, Martínez-Cruz LA, Corrales FJ, Rubio A. Sevilla JL, et al. Among authors: rubio a. IEEE/ACM Trans Comput Biol Bioinform. 2005 Oct-Dec;2(4):330-8. doi: 10.1109/TCBB.2005.50. IEEE/ACM Trans Comput Biol Bioinform. 2005. PMID: 17044170

2

GARBAN: genomic analysis and rapid biological annotation of cDNA microarray and proteomic data.

Martínez-Cruz LA, Rubio A, Martínez-Chantar ML, Labarga A, Barrio I, Podhorski A, Segura V, Sevilla Campo JL, Avila MA, Mato JM. Martínez-Cruz LA, et al. Among authors: rubio a. Bioinformatics. 2003 Nov 1;19(16):2158-60. doi: 10.1093/bioinformatics/btg291. Bioinformatics. 2003. PMID: 14594726 Free article.

3

GARBAN II: an integrative framework for extracting biological information from proteomic and genomic data.

Segura V, Podhorski A, Guruceaga E, Sevilla JL, Corrales FJ, Rubio A. Segura V, et al. Among authors: rubio a. Proteomics. 2006 Apr;6 Suppl 1:S12-5. doi: 10.1002/pmic.200500313. Proteomics. 2006. PMID: 16511812 Review.

4

FactorY, a bioinformatic resource for genome-wide promoter analysis.

Guruceaga E, Segura V, Corrales FJ, Rubio A. Guruceaga E, et al. Among authors: rubio a. Comput Biol Med. 2009 Apr;39(4):385-7. doi: 10.1016/j.compbiomed.2009.01.008. Epub 2009 Mar 9. Comput Biol Med. 2009. PMID: 19272592

5

Genome-wide proximal promoter analysis and interpretation.

Guruceaga E, Segura V, Corrales FJ, Rubio A. Guruceaga E, et al. Among authors: rubio a. Methods Mol Biol. 2010;593:157-74. doi: 10.1007/978-1-60327-194-3_8. Methods Mol Biol. 2010. PMID: 19957149

6

Identification of a gene-pathway associated with non-alcoholic steatohepatitis.

Rubio A, Guruceaga E, Vázquez-Chantada M, Sandoval J, Martínez-Cruz LA, Segura V, Sevilla JL, Podhorski A, Corrales FJ, Torres L, Rodríguez M, Aillet F, Ariz U, Arrieta FM, Caballería J, Martín-Duce A, Lu SC, Martínez-Chantar ML, Mato JM. Rubio A, et al. J Hepatol. 2007 Apr;46(4):708-18. doi: 10.1016/j.jhep.2006.10.021. Epub 2006 Nov 30. J Hepatol. 2007. PMID: 17275126

7

Selection of human tissue-specific elementary flux modes using gene expression data.

Rezola A, Pey J, de Figueiredo LF, Podhorski A, Schuster S, Rubio A, Planes FJ. Rezola A, et al. Among authors: rubio a. Bioinformatics. 2013 Aug 15;29(16):2009-16. doi: 10.1093/bioinformatics/btt328. Epub 2013 Jun 6. Bioinformatics. 2013. PMID: 23742984

8

SPACE: an algorithm to predict and quantify alternatively spliced isoforms using microarrays.

Anton MA, Gorostiaga D, Guruceaga E, Segura V, Carmona-Saez P, Pascual-Montano A, Pio R, Montuenga LM, Rubio A. Anton MA, et al. Among authors: rubio a. Genome Biol. 2008;9(2):R46. doi: 10.1186/gb-2008-9-2-r46. Epub 2008 Feb 29. Genome Biol. 2008. PMID: 18312629 Free PMC article.

9

Functional proteomics of nonalcoholic steatohepatitis: mitochondrial proteins as targets of S-adenosylmethionine.

Santamaria E, Avila MA, Latasa MU, Rubio A, Martin-Duce A, Lu SC, Mato JM, Corrales FJ. Santamaria E, et al. Among authors: rubio a. Proc Natl Acad Sci U S A. 2003 Mar 18;100(6):3065-70. doi: 10.1073/pnas.0536625100. Epub 2003 Mar 11. Proc Natl Acad Sci U S A. 2003. PMID: 12631701 Free PMC article.

10

Computing the shortest elementary flux modes in genome-scale metabolic networks.

de Figueiredo LF, Podhorski A, Rubio A, Kaleta C, Beasley JE, Schuster S, Planes FJ. de Figueiredo LF, et al. Among authors: rubio a. Bioinformatics. 2009 Dec 1;25(23):3158-65. doi: 10.1093/bioinformatics/btp564. Epub 2009 Sep 30. Bioinformatics. 2009. PMID: 19793869

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