Palsson BØ - Search Results

1

Comparative genome sequencing of Escherichia coli allows observation of bacterial evolution on a laboratory timescale.

Herring CD, Raghunathan A, Honisch C, Patel T, Applebee MK, Joyce AR, Albert TJ, Blattner FR, van den Boom D, Cantor CR, Palsson BØ. Herring CD, et al. Among authors: palsson bo. Nat Genet. 2006 Dec;38(12):1406-12. doi: 10.1038/ng1906. Epub 2006 Nov 5. Nat Genet. 2006. PMID: 17086184

2

The Escherichia coli MG1655 in silico metabolic genotype: its definition, characteristics, and capabilities.

Edwards JS, Palsson BO. Edwards JS, et al. Among authors: palsson bo. Proc Natl Acad Sci U S A. 2000 May 9;97(10):5528-33. doi: 10.1073/pnas.97.10.5528. Proc Natl Acad Sci U S A. 2000. PMID: 10805808 Free PMC article.

3

In silico predictions of Escherichia coli metabolic capabilities are consistent with experimental data.

Edwards JS, Ibarra RU, Palsson BO. Edwards JS, et al. Among authors: palsson bo. Nat Biotechnol. 2001 Feb;19(2):125-30. doi: 10.1038/84379. Nat Biotechnol. 2001. PMID: 11175725

4

Transcriptional regulation in constraints-based metabolic models of Escherichia coli.

Covert MW, Palsson BØ. Covert MW, et al. Among authors: palsson bo. J Biol Chem. 2002 Aug 2;277(31):28058-64. doi: 10.1074/jbc.M201691200. Epub 2002 May 10. J Biol Chem. 2002. PMID: 12006566 Free article.

5

Escherichia coli K-12 undergoes adaptive evolution to achieve in silico predicted optimal growth.

Ibarra RU, Edwards JS, Palsson BO. Ibarra RU, et al. Among authors: palsson bo. Nature. 2002 Nov 14;420(6912):186-9. doi: 10.1038/nature01149. Nature. 2002. PMID: 12432395

6

Thirteen years of building constraint-based in silico models of Escherichia coli.

Reed JL, Palsson BØ. Reed JL, et al. Among authors: palsson bo. J Bacteriol. 2003 May;185(9):2692-9. doi: 10.1128/JB.185.9.2692-2699.2003. J Bacteriol. 2003. PMID: 12700248 Free PMC article. Review. No abstract available.

7

Scalable method to determine mutations that occur during adaptive evolution of Escherichia coli.

Raghunathan A, Palsson BO. Raghunathan A, et al. Among authors: palsson bo. Biotechnol Lett. 2003 Mar;25(5):435-41. doi: 10.1023/a:1022497310798. Biotechnol Lett. 2003. PMID: 12882568

8

An expanded genome-scale model of Escherichia coli K-12 (iJR904 GSM/GPR).

Reed JL, Vo TD, Schilling CH, Palsson BO. Reed JL, et al. Among authors: palsson bo. Genome Biol. 2003;4(9):R54. doi: 10.1186/gb-2003-4-9-r54. Epub 2003 Aug 28. Genome Biol. 2003. PMID: 12952533 Free PMC article.

9

Genome-scale analysis of the uses of the Escherichia coli genome: model-driven analysis of heterogeneous data sets.

Allen TE, Herrgård MJ, Liu M, Qiu Y, Glasner JD, Blattner FR, Palsson BØ. Allen TE, et al. Among authors: palsson bo. J Bacteriol. 2003 Nov;185(21):6392-9. doi: 10.1128/JB.185.21.6392-6399.2003. J Bacteriol. 2003. PMID: 14563874 Free PMC article.

10

Description and interpretation of adaptive evolution of Escherichia coli K-12 MG1655 by using a genome-scale in silico metabolic model.

Fong SS, Marciniak JY, Palsson BØ. Fong SS, et al. Among authors: palsson bo. J Bacteriol. 2003 Nov;185(21):6400-8. doi: 10.1128/JB.185.21.6400-6408.2003. J Bacteriol. 2003. PMID: 14563875 Free PMC article.

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