Lipfert J - Search Results

1

Structural transitions and thermodynamics of a glycine-dependent riboswitch from Vibrio cholerae.

Lipfert J, Das R, Chu VB, Kudaravalli M, Boyd N, Herschlag D, Doniach S. Lipfert J, et al. J Mol Biol. 2007 Feb 2;365(5):1393-406. doi: 10.1016/j.jmb.2006.10.022. Epub 2006 Oct 13. J Mol Biol. 2007. PMID: 17118400 Free PMC article.

2

Thermally Switchable Nanogate Based on Polymer Phase Transition.

Kolbeck PJ, Benaoudia D, Chazot-Franguiadakis L, Delecourt G, Mathé J, Li S, Bonnet R, Martin P, Lipfert J, Salvetti A, Boukhet M, Bennevault V, Lacroix JC, Guégan P, Montel F. Kolbeck PJ, et al. Among authors: lipfert j. Nano Lett. 2023 Jun 14;23(11):4862-4869. doi: 10.1021/acs.nanolett.3c00438. Epub 2023 May 22. Nano Lett. 2023. PMID: 37212527

3

High-yield ligation-free assembly of DNA constructs with nucleosome positioning sequence repeats for single-molecule manipulation assays.

Lin YY, Brouns T, Kolbeck PJ, Vanderlinden W, Lipfert J. Lin YY, et al. Among authors: lipfert j. J Biol Chem. 2023 Jul;299(7):104874. doi: 10.1016/j.jbc.2023.104874. Epub 2023 May 29. J Biol Chem. 2023. PMID: 37257819 Free PMC article.

4

Cooperative dynamics of DNA-grafted magnetic nanoparticles optimize magnetic biosensing and coupling to DNA origami.

Lak A, Wang Y, Kolbeck PJ, Pauer C, Chowdhury MS, Cassani M, Ludwig F, Viereck T, Selbach F, Tinnefeld P, Schilling M, Liedl T, Tavacoli J, Lipfert J. Lak A, et al. Among authors: lipfert j. Nanoscale. 2024 Apr 18;16(15):7678-7689. doi: 10.1039/d3nr06253h. Nanoscale. 2024. PMID: 38533617

5

DNA Origami Fiducial for Accurate 3D Atomic Force Microscopy Imaging.

Kolbeck PJ, Dass M, Martynenko IV, van Dijk-Moes RJA, Brouwer KJH, van Blaaderen A, Vanderlinden W, Liedl T, Lipfert J. Kolbeck PJ, et al. Among authors: lipfert j. Nano Lett. 2023 Feb 22;23(4):1236-1243. doi: 10.1021/acs.nanolett.2c04299. Epub 2023 Feb 6. Nano Lett. 2023. PMID: 36745573 Free PMC article.

6

Supercoiling-dependent DNA binding: quantitative modeling and applications to bulk and single-molecule experiments.

Kolbeck PJ, Tišma M, Analikwu BT, Vanderlinden W, Dekker C, Lipfert J. Kolbeck PJ, et al. Among authors: lipfert j. Nucleic Acids Res. 2024 Jan 11;52(1):59-72. doi: 10.1093/nar/gkad1055. Nucleic Acids Res. 2024. PMID: 38000393 Free PMC article.

7

Protein misfolding and amyloid formation for the peptide GNNQQNY from yeast prion protein Sup35: simulation by reaction path annealing.

Lipfert J, Franklin J, Wu F, Doniach S. Lipfert J, et al. J Mol Biol. 2005 Jun 10;349(3):648-58. doi: 10.1016/j.jmb.2005.03.083. Epub 2005 Apr 13. J Mol Biol. 2005. PMID: 15896350

8

Unusual compactness of a polyproline type II structure.

Zagrovic B, Lipfert J, Sorin EJ, Millett IS, van Gunsteren WF, Doniach S, Pande VS. Zagrovic B, et al. Among authors: lipfert j. Proc Natl Acad Sci U S A. 2005 Aug 16;102(33):11698-703. doi: 10.1073/pnas.0409693102. Epub 2005 Aug 5. Proc Natl Acad Sci U S A. 2005. PMID: 16085707 Free PMC article.

9

Expression, purification, and characterization of Thermotoga maritima membrane proteins for structure determination.

Columbus L, Lipfert J, Klock H, Millett I, Doniach S, Lesley SA. Columbus L, et al. Among authors: lipfert j. Protein Sci. 2006 May;15(5):961-75. doi: 10.1110/ps.051874706. Epub 2006 Apr 5. Protein Sci. 2006. PMID: 16597824 Free PMC article.

10

Mis-translation of a computationally designed protein yields an exceptionally stable homodimer: implications for protein engineering and evolution.

Dantas G, Watters AL, Lunde BM, Eletr ZM, Isern NG, Roseman T, Lipfert J, Doniach S, Tompa M, Kuhlman B, Stoddard BL, Varani G, Baker D. Dantas G, et al. Among authors: lipfert j. J Mol Biol. 2006 Oct 6;362(5):1004-24. doi: 10.1016/j.jmb.2006.07.092. Epub 2006 Aug 4. J Mol Biol. 2006. PMID: 16949611

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