Rocchia W - Search Results

1

Green fluorescent protein ground states: the influence of a second protonation site near the chromophore.

Bizzarri R, Nifosì R, Abbruzzetti S, Rocchia W, Guidi S, Arosio D, Garau G, Campanini B, Grandi E, Ricci F, Viappiani C, Beltram F. Bizzarri R, et al. Among authors: rocchia w. Biochemistry. 2007 May 8;46(18):5494-504. doi: 10.1021/bi602646r. Epub 2007 Apr 17. Biochemistry. 2007. PMID: 17439158

2

A simple and accurate protocol for absolute polar metabolite quantification in cell cultures using quantitative nuclear magnetic resonance.

Goldoni L, Beringhelli T, Rocchia W, Realini N, Piomelli D. Goldoni L, et al. Among authors: rocchia w. Anal Biochem. 2016 May 15;501:26-34. doi: 10.1016/j.ab.2016.02.009. Epub 2016 Feb 18. Anal Biochem. 2016. PMID: 26898303 Free article.

3

Electrostatic potential calculation for biomolecules--creating a database of pre-calculated values reported on a per residue basis for all PDB protein structures.

Rocchia W, Neshich G. Rocchia W, et al. Genet Mol Res. 2007 Oct 5;6(4):923-36. Genet Mol Res. 2007. PMID: 18058713 Free article.

4

A catalytically silent FAAH-1 variant drives anandamide transport in neurons.

Fu J, Bottegoni G, Sasso O, Bertorelli R, Rocchia W, Masetti M, Guijarro A, Lodola A, Armirotti A, Garau G, Bandiera T, Reggiani A, Mor M, Cavalli A, Piomelli D. Fu J, et al. Among authors: rocchia w. Nat Neurosci. 2011 Nov 20;15(1):64-9. doi: 10.1038/nn.2986. Nat Neurosci. 2011. PMID: 22101642 Free PMC article.

5

Mapping all-atom models onto one-bead Coarse Grained Models: general properties and applications to a minimal polypeptide model.

Tozzini V, Rocchia W, McCammon JA. Tozzini V, et al. Among authors: rocchia w. J Chem Theory Comput. 2006;2(3):667-673. doi: 10.1021/ct050294k. J Chem Theory Comput. 2006. PMID: 19461947 Free PMC article.

6

JavaProtein Dossier: a novel web-based data visualization tool for comprehensive analysis of protein structure.

Neshich G, Rocchia W, Mancini AL, Yamagishi ME, Kuser PR, Fileto R, Baudet C, Pinto IP, Montagner AJ, Palandrani JF, Krauchenco JN, Torres RC, Souza S, Togawa RC, Higa RH. Neshich G, et al. Among authors: rocchia w. Nucleic Acids Res. 2004 Jul 1;32(Web Server issue):W595-601. doi: 10.1093/nar/gkh480. Nucleic Acids Res. 2004. PMID: 15215458 Free PMC article.

7

The ligand binding mechanism to purine nucleoside phosphorylase elucidated via molecular dynamics and machine learning.

Decherchi S, Berteotti A, Bottegoni G, Rocchia W, Cavalli A. Decherchi S, et al. Among authors: rocchia w. Nat Commun. 2015 Jan 27;6:6155. doi: 10.1038/ncomms7155. Nat Commun. 2015. PMID: 25625196 Free PMC article.

8

Absolute nutrient concentration measurements in cell culture media: (1)H q-NMR spectra and data to compare the efficiency of pH-controlled protein precipitation versus CPMG or post-processing filtering approaches.

Goldoni L, Beringhelli T, Rocchia W, Realini N, Piomelli D. Goldoni L, et al. Among authors: rocchia w. Data Brief. 2016 May 30;8:387-93. doi: 10.1016/j.dib.2016.05.054. eCollection 2016 Sep. Data Brief. 2016. PMID: 27331118 Free PMC article.

9

Application of conformational clustering in protein-ligand docking.

Bottegoni G, Rocchia W, Cavalli A. Bottegoni G, et al. Among authors: rocchia w. Methods Mol Biol. 2012;819:169-86. doi: 10.1007/978-1-61779-465-0_12. Methods Mol Biol. 2012. PMID: 22183537

10

Molecular mechanics and dynamics: numerical tools to sample the configuration space.

Masetti M, Rocchia W. Masetti M, et al. Among authors: rocchia w. Front Biosci (Landmark Ed). 2014 Jan 1;19(4):578-604. doi: 10.2741/4229. Front Biosci (Landmark Ed). 2014. PMID: 24389206 Free article. Review.

Save citations to file

Email citations

Send citations to clipboard

Add to Collections

Add to My Bibliography

Create a file for external citation management software

Your saved search

Your RSS Feed

My Custom Filters

Publication date

Text availability

Article attribute

Article type

Article Language

Species

Sex

Age

Other

69 results

Search Page

Filters