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petal: Co-expression network modelling in R.
Petereit J, Smith S, Harris FC Jr, Schlauch KA. Petereit J, et al. Among authors: harris fc jr. BMC Syst Biol. 2016 Aug 1;10 Suppl 2(Suppl 2):51. doi: 10.1186/s12918-016-0298-8. BMC Syst Biol. 2016. PMID: 27490697 Free PMC article.
ModFossa: A library for modeling ion channels using Python.
Ferneyhough GB, Thibealut CM, Dascalu SM, Harris FC Jr. Ferneyhough GB, et al. Among authors: harris fc jr. J Bioinform Comput Biol. 2016 Jun;14(3):1642003. doi: 10.1142/S0219720016420038. Epub 2016 Mar 2. J Bioinform Comput Biol. 2016. PMID: 26932271
Simulation of networks of spiking neurons: a review of tools and strategies.
Brette R, Rudolph M, Carnevale T, Hines M, Beeman D, Bower JM, Diesmann M, Morrison A, Goodman PH, Harris FC Jr, Zirpe M, Natschläger T, Pecevski D, Ermentrout B, Djurfeldt M, Lansner A, Rochel O, Vieville T, Muller E, Davison AP, El Boustani S, Destexhe A. Brette R, et al. Among authors: harris fc jr. J Comput Neurosci. 2007 Dec;23(3):349-98. doi: 10.1007/s10827-007-0038-6. Epub 2007 Jul 12. J Comput Neurosci. 2007. PMID: 17629781 Free PMC article. Review.