Kin T - Search Results

1

miRRim: a novel system to find conserved miRNAs with high sensitivity and specificity.

Terai G, Komori T, Asai K, Kin T. Terai G, et al. Among authors: kin t. RNA. 2007 Dec;13(12):2081-90. doi: 10.1261/rna.655107. Epub 2007 Oct 24. RNA. 2007. PMID: 17959929 Free PMC article.

2

Marginalized kernels for biological sequences.

Tsuda K, Kin T, Asai K. Tsuda K, et al. Among authors: kin t. Bioinformatics. 2002;18 Suppl 1:S268-75. doi: 10.1093/bioinformatics/18.suppl_1.s268. Bioinformatics. 2002. PMID: 12169556

3

Marginalized kernels for RNA sequence data analysis.

Kin T, Tsuda K, Asai K. Kin T, et al. Genome Inform. 2002;13:112-22. Genome Inform. 2002. PMID: 14571380

4

fRNAdb: a platform for mining/annotating functional RNA candidates from non-coding RNA sequences.

Kin T, Yamada K, Terai G, Okida H, Yoshinari Y, Ono Y, Kojima A, Kimura Y, Komori T, Asai K. Kin T, et al. Nucleic Acids Res. 2007 Jan;35(Database issue):D145-8. doi: 10.1093/nar/gkl837. Epub 2006 Nov 11. Nucleic Acids Res. 2007. PMID: 17099231 Free PMC article.

5

Robust prediction of consensus secondary structures using averaged base pairing probability matrices.

Kiryu H, Kin T, Asai K. Kiryu H, et al. Among authors: kin t. Bioinformatics. 2007 Feb 15;23(4):434-41. doi: 10.1093/bioinformatics/btl636. Epub 2006 Dec 20. Bioinformatics. 2007. PMID: 17182698

6

Murlet: a practical multiple alignment tool for structural RNA sequences.

Kiryu H, Tabei Y, Kin T, Asai K. Kiryu H, et al. Among authors: kin t. Bioinformatics. 2007 Jul 1;23(13):1588-98. doi: 10.1093/bioinformatics/btm146. Epub 2007 Apr 25. Bioinformatics. 2007. PMID: 17459961

7

Rfold: an exact algorithm for computing local base pairing probabilities.

Kiryu H, Kin T, Asai K. Kiryu H, et al. Among authors: kin t. Bioinformatics. 2008 Feb 1;24(3):367-73. doi: 10.1093/bioinformatics/btm591. Epub 2007 Dec 4. Bioinformatics. 2008. PMID: 18056736

8

SCARNA: fast and accurate structural alignment of RNA sequences by matching fixed-length stem fragments.

Tabei Y, Tsuda K, Kin T, Asai K. Tabei Y, et al. Among authors: kin t. Bioinformatics. 2006 Jul 15;22(14):1723-9. doi: 10.1093/bioinformatics/btl177. Epub 2006 May 11. Bioinformatics. 2006. PMID: 16690634

9

A fast structural multiple alignment method for long RNA sequences.

Tabei Y, Kiryu H, Kin T, Asai K. Tabei Y, et al. Among authors: kin t. BMC Bioinformatics. 2008 Jan 23;9:33. doi: 10.1186/1471-2105-9-33. BMC Bioinformatics. 2008. PMID: 18215258 Free PMC article.

10

Mining frequent stem patterns from unaligned RNA sequences.

Hamada M, Tsuda K, Kudo T, Kin T, Asai K. Hamada M, et al. Among authors: kin t. Bioinformatics. 2006 Oct 15;22(20):2480-7. doi: 10.1093/bioinformatics/btl431. Epub 2006 Aug 14. Bioinformatics. 2006. PMID: 16908501

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