Srinivasan AR - Search Results

1

Feature extraction using molecular planes for fuzzy relational clustering of a flexible dopamine reuptake inhibitor.

Banerjee A, Misra M, Pai D, Shih LY, Woodley R, Lu XJ, Srinivasan AR, Olson WK, Davé RN, Venanzi CA. Banerjee A, et al. Among authors: srinivasan ar. J Chem Inf Model. 2007 Nov-Dec;47(6):2216-27. doi: 10.1021/ci7001632. Epub 2007 Oct 30. J Chem Inf Model. 2007. PMID: 17967005

2

DNA associations: packing calculations in A-, B-, and Z-DNA structures.

Srinivasan AR, Olson WK. Srinivasan AR, et al. Biophys Chem. 1992 Jul;43(3):279-310. doi: 10.1016/0301-4622(92)85027-2. Biophys Chem. 1992. PMID: 1643240

3

How stiff is DNA?

Zheng G, Czapla L, Srinivasan AR, Olson WK. Zheng G, et al. Among authors: srinivasan ar. Phys Chem Chem Phys. 2010 Feb 14;12(6):1399-406. doi: 10.1039/b916183j. Epub 2009 Dec 23. Phys Chem Chem Phys. 2010. PMID: 20119618 Free PMC article.

4

Nucleic acid model building: the multiple backbone solutions associated with a given base morphology.

Srinivasan AR, Olson WK. Srinivasan AR, et al. J Biomol Struct Dyn. 1987 Jun;4(6):895-938. doi: 10.1080/07391102.1987.10507690. J Biomol Struct Dyn. 1987. PMID: 3270539

5

The translation of DNA primary base sequence into three-dimensional structure.

Olson WK, Srinivasan AR. Olson WK, et al. Among authors: srinivasan ar. Comput Appl Biosci. 1988 Mar;4(1):133-42. doi: 10.1093/bioinformatics/4.1.133. Comput Appl Biosci. 1988. PMID: 3382987

6

Computer models of DNA four-way junctions.

Srinivasan AR, Olson WK. Srinivasan AR, et al. Biochemistry. 1994 Aug 16;33(32):9389-404. doi: 10.1021/bi00198a004. Biochemistry. 1994. PMID: 8068615

7

A systematic method for studying the spatial distribution of water molecules around nucleic acid bases.

Schneider B, Cohen DM, Schleifer L, Srinivasan AR, Olson WK, Berman HM. Schneider B, et al. Among authors: srinivasan ar. Biophys J. 1993 Dec;65(6):2291-303. doi: 10.1016/S0006-3495(93)81306-7. Biophys J. 1993. PMID: 8312469 Free PMC article.

8

Conformational studies of (2'-5') polynucleotides: theoretical computations of energy, base morphology, helical structure, and duplex formation.

Srinivasan AR, Olson WK. Srinivasan AR, et al. Nucleic Acids Res. 1986 Jul 11;14(13):5461-79. doi: 10.1093/nar/14.13.5461. Nucleic Acids Res. 1986. PMID: 2426656 Free PMC article.

9

Base sequence effects in double helical DNA. I. Potential energy estimates of local base morphology.

Srinivasan AR, Torres R, Clark W, Olson WK. Srinivasan AR, et al. J Biomol Struct Dyn. 1987 Dec;5(3):459-96. doi: 10.1080/07391102.1987.10506409. J Biomol Struct Dyn. 1987. PMID: 3271482

10

Properties of the Nucleic-acid Bases in Free and Watson-Crick Hydrogen-bonded States: Computational Insights into the Sequence-dependent Features of Double-helical DNA.

Srinivasan AR, Sauers RR, Fenley MO, Boschitsch AH, Matsumoto A, Colasanti AV, Olson WK. Srinivasan AR, et al. Biophys Rev. 2009 Mar 1;1(1):13-20. doi: 10.1007/s12551-008-0003-2. Biophys Rev. 2009. PMID: 21218180 Free PMC article.

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