Larimer FW - Search Results

1

Whole-genome analysis of the ammonia-oxidizing bacterium, Nitrosomonas eutropha C91: implications for niche adaptation.

Stein LY, Arp DJ, Berube PM, Chain PS, Hauser L, Jetten MS, Klotz MG, Larimer FW, Norton JM, Op den Camp HJ, Shin M, Wei X. Stein LY, et al. Among authors: larimer fw. Environ Microbiol. 2007 Dec;9(12):2993-3007. doi: 10.1111/j.1462-2920.2007.01409.x. Environ Microbiol. 2007. PMID: 17991028

2

Genome sequence of the chemolithoautotrophic nitrite-oxidizing bacterium Nitrobacter winogradskyi Nb-255.

Starkenburg SR, Chain PS, Sayavedra-Soto LA, Hauser L, Land ML, Larimer FW, Malfatti SA, Klotz MG, Bottomley PJ, Arp DJ, Hickey WJ. Starkenburg SR, et al. Among authors: larimer fw. Appl Environ Microbiol. 2006 Mar;72(3):2050-63. doi: 10.1128/AEM.72.3.2050-2063.2006. Appl Environ Microbiol. 2006. PMID: 16517654 Free PMC article.

3

Complete genome sequence of the marine, chemolithoautotrophic, ammonia-oxidizing bacterium Nitrosococcus oceani ATCC 19707.

Klotz MG, Arp DJ, Chain PS, El-Sheikh AF, Hauser LJ, Hommes NG, Larimer FW, Malfatti SA, Norton JM, Poret-Peterson AT, Vergez LM, Ward BB. Klotz MG, et al. Among authors: larimer fw. Appl Environ Microbiol. 2006 Sep;72(9):6299-315. doi: 10.1128/AEM.00463-06. Appl Environ Microbiol. 2006. PMID: 16957257 Free PMC article.

4

Complete genome sequence of Nitrosospira multiformis, an ammonia-oxidizing bacterium from the soil environment.

Norton JM, Klotz MG, Stein LY, Arp DJ, Bottomley PJ, Chain PS, Hauser LJ, Land ML, Larimer FW, Shin MW, Starkenburg SR. Norton JM, et al. Among authors: larimer fw. Appl Environ Microbiol. 2008 Jun;74(11):3559-72. doi: 10.1128/AEM.02722-07. Epub 2008 Apr 4. Appl Environ Microbiol. 2008. PMID: 18390676 Free PMC article.

5

Genome of the epsilonproteobacterial chemolithoautotroph Sulfurimonas denitrificans.

Sievert SM, Scott KM, Klotz MG, Chain PS, Hauser LJ, Hemp J, Hügler M, Land M, Lapidus A, Larimer FW, Lucas S, Malfatti SA, Meyer F, Paulsen IT, Ren Q, Simon J; USF Genomics Class. Sievert SM, et al. Among authors: larimer fw. Appl Environ Microbiol. 2008 Feb;74(4):1145-56. doi: 10.1128/AEM.01844-07. Epub 2007 Dec 7. Appl Environ Microbiol. 2008. PMID: 18065616 Free PMC article.

6

Complete genome sequence of Nitrobacter hamburgensis X14 and comparative genomic analysis of species within the genus Nitrobacter.

Starkenburg SR, Larimer FW, Stein LY, Klotz MG, Chain PS, Sayavedra-Soto LA, Poret-Peterson AT, Gentry ME, Arp DJ, Ward B, Bottomley PJ. Starkenburg SR, et al. Among authors: larimer fw. Appl Environ Microbiol. 2008 May;74(9):2852-63. doi: 10.1128/AEM.02311-07. Epub 2008 Mar 7. Appl Environ Microbiol. 2008. PMID: 18326675 Free PMC article.

7

Complete genome sequence of the ammonia-oxidizing bacterium and obligate chemolithoautotroph Nitrosomonas europaea.

Chain P, Lamerdin J, Larimer F, Regala W, Lao V, Land M, Hauser L, Hooper A, Klotz M, Norton J, Sayavedra-Soto L, Arciero D, Hommes N, Whittaker M, Arp D. Chain P, et al. J Bacteriol. 2003 May;185(9):2759-73. doi: 10.1128/JB.185.9.2759-2773.2003. J Bacteriol. 2003. PMID: 12700255 Free PMC article.

8

The genome sequence of Psychrobacter arcticus 273-4, a psychroactive Siberian permafrost bacterium, reveals mechanisms for adaptation to low-temperature growth.

Ayala-del-Río HL, Chain PS, Grzymski JJ, Ponder MA, Ivanova N, Bergholz PW, Di Bartolo G, Hauser L, Land M, Bakermans C, Rodrigues D, Klappenbach J, Zarka D, Larimer F, Richardson P, Murray A, Thomashow M, Tiedje JM. Ayala-del-Río HL, et al. Appl Environ Microbiol. 2010 Apr;76(7):2304-12. doi: 10.1128/AEM.02101-09. Epub 2010 Feb 12. Appl Environ Microbiol. 2010. PMID: 20154119 Free PMC article.

9

Multiple genome sequences reveal adaptations of a phototrophic bacterium to sediment microenvironments.

Oda Y, Larimer FW, Chain PS, Malfatti S, Shin MV, Vergez LM, Hauser L, Land ML, Braatsch S, Beatty JT, Pelletier DA, Schaefer AL, Harwood CS. Oda Y, et al. Among authors: larimer fw. Proc Natl Acad Sci U S A. 2008 Nov 25;105(47):18543-8. doi: 10.1073/pnas.0809160105. Epub 2008 Nov 19. Proc Natl Acad Sci U S A. 2008. PMID: 19020098 Free PMC article.

10

The genome sequence of the obligately chemolithoautotrophic, facultatively anaerobic bacterium Thiobacillus denitrificans.

Beller HR, Chain PS, Letain TE, Chakicherla A, Larimer FW, Richardson PM, Coleman MA, Wood AP, Kelly DP. Beller HR, et al. Among authors: larimer fw. J Bacteriol. 2006 Feb;188(4):1473-88. doi: 10.1128/JB.188.4.1473-1488.2006. J Bacteriol. 2006. PMID: 16452431 Free PMC article.

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