Pierce SE - Search Results

1

Genome-wide analysis of barcoded Saccharomyces cerevisiae gene-deletion mutants in pooled cultures.

Pierce SE, Davis RW, Nislow C, Giaever G. Pierce SE, et al. Nat Protoc. 2007;2(11):2958-74. doi: 10.1038/nprot.2007.427. Nat Protoc. 2007. PMID: 18007632

2

A unique and universal molecular barcode array.

Pierce SE, Fung EL, Jaramillo DF, Chu AM, Davis RW, Nislow C, Giaever G. Pierce SE, et al. Nat Methods. 2006 Aug;3(8):601-3. doi: 10.1038/nmeth905. Nat Methods. 2006. PMID: 16862133

3

The chemical genomic portrait of yeast: uncovering a phenotype for all genes.

Hillenmeyer ME, Fung E, Wildenhain J, Pierce SE, Hoon S, Lee W, Proctor M, St Onge RP, Tyers M, Koller D, Altman RB, Davis RW, Nislow C, Giaever G. Hillenmeyer ME, et al. Among authors: pierce se. Science. 2008 Apr 18;320(5874):362-5. doi: 10.1126/science.1150021. Science. 2008. PMID: 18420932 Free PMC article.

4

Chemogenomic approaches to elucidation of gene function and genetic pathways.

Pierce SE, Davis RW, Nislow C, Giaever G. Pierce SE, et al. Methods Mol Biol. 2009;548:115-43. doi: 10.1007/978-1-59745-540-4_7. Methods Mol Biol. 2009. PMID: 19521822

5

Whole-genome sequencing of the efficient industrial fuel-ethanol fermentative Saccharomyces cerevisiae strain CAT-1.

Babrzadeh F, Jalili R, Wang C, Shokralla S, Pierce S, Robinson-Mosher A, Nyren P, Shafer RW, Basso LC, de Amorim HV, de Oliveira AJ, Davis RW, Ronaghi M, Gharizadeh B, Stambuk BU. Babrzadeh F, et al. Mol Genet Genomics. 2012 Jun;287(6):485-94. doi: 10.1007/s00438-012-0695-7. Epub 2012 May 6. Mol Genet Genomics. 2012. PMID: 22562254

6

CRISPR screens in cancer spheroids identify 3D growth-specific vulnerabilities.

Han K, Pierce SE, Li A, Spees K, Anderson GR, Seoane JA, Lo YH, Dubreuil M, Olivas M, Kamber RA, Wainberg M, Kostyrko K, Kelly MR, Yousefi M, Simpkins SW, Yao D, Lee K, Kuo CJ, Jackson PK, Sweet-Cordero A, Kundaje A, Gentles AJ, Curtis C, Winslow MM, Bassik MC. Han K, et al. Among authors: pierce se. Nature. 2020 Apr;580(7801):136-141. doi: 10.1038/s41586-020-2099-x. Epub 2020 Mar 11. Nature. 2020. PMID: 32238925 Free PMC article.

7

ArchR is a scalable software package for integrative single-cell chromatin accessibility analysis.

Granja JM, Corces MR, Pierce SE, Bagdatli ST, Choudhry H, Chang HY, Greenleaf WJ. Granja JM, et al. Among authors: pierce se. Nat Genet. 2021 Mar;53(3):403-411. doi: 10.1038/s41588-021-00790-6. Epub 2021 Feb 25. Nat Genet. 2021. PMID: 33633365 Free PMC article.

8

High-throughput single-cell chromatin accessibility CRISPR screens enable unbiased identification of regulatory networks in cancer.

Pierce SE, Granja JM, Greenleaf WJ. Pierce SE, et al. Nat Commun. 2021 May 20;12(1):2969. doi: 10.1038/s41467-021-23213-w. Nat Commun. 2021. PMID: 34016988 Free PMC article.

9

LKB1 inactivation modulates chromatin accessibility to drive metastatic progression.

Pierce SE, Granja JM, Corces MR, Brady JJ, Tsai MK, Pierce AB, Tang R, Chu P, Feldser DM, Chang HY, Bassik MC, Greenleaf WJ, Winslow MM. Pierce SE, et al. Among authors: pierce ab. Nat Cell Biol. 2021 Aug;23(8):915-924. doi: 10.1038/s41556-021-00728-4. Epub 2021 Aug 2. Nat Cell Biol. 2021. PMID: 34341533 Free PMC article.

10

LKB1 drives stasis and C/EBP-mediated reprogramming to an alveolar type II fate in lung cancer.

Murray CW, Brady JJ, Han M, Cai H, Tsai MK, Pierce SE, Cheng R, Demeter J, Feldser DM, Jackson PK, Shackelford DB, Winslow MM. Murray CW, et al. Among authors: pierce se. Nat Commun. 2022 Feb 28;13(1):1090. doi: 10.1038/s41467-022-28619-8. Nat Commun. 2022. PMID: 35228570 Free PMC article.

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