Murcia M - Search Results

1

Functional and computational studies of the ligand-associated metal binding site of beta3 integrins.

Murcia M, Jirouskova M, Li J, Coller BS, Filizola M. Murcia M, et al. Proteins. 2008 Jun;71(4):1779-91. doi: 10.1002/prot.21859. Proteins. 2008. PMID: 18175315 Free PMC article.

2

Mapping early conformational changes in alphaIIb and beta3 during biogenesis reveals a potential mechanism for alphaIIbbeta3 adopting its bent conformation.

Mitchell WB, Li J, Murcia M, Valentin N, Newman PJ, Coller BS. Mitchell WB, et al. Among authors: murcia m. Blood. 2007 May 1;109(9):3725-32. doi: 10.1182/blood-2006-11-058420. Epub 2007 Jan 5. Blood. 2007. PMID: 17209052 Free PMC article.

3

Targeted molecular dynamics reveals overall common conformational changes upon hybrid domain swing-out in beta3 integrins.

Provasi D, Murcia M, Coller BS, Filizola M. Provasi D, et al. Among authors: murcia m. Proteins. 2009 Nov 1;77(2):477-89. doi: 10.1002/prot.22463. Proteins. 2009. PMID: 19455709 Free PMC article.

4

Effects of limiting extension at the alphaIIb genu on ligand binding to integrin alphaIIbbeta3.

Blue R, Li J, Steinberger J, Murcia M, Filizola M, Coller BS. Blue R, et al. Among authors: murcia m. J Biol Chem. 2010 Jun 4;285(23):17604-13. doi: 10.1074/jbc.M110.107763. Epub 2010 Apr 2. J Biol Chem. 2010. PMID: 20363746 Free PMC article.

5

Application of high-throughput screening to identify a novel alphaIIb-specific small- molecule inhibitor of alphaIIbbeta3-mediated platelet interaction with fibrinogen.

Blue R, Murcia M, Karan C, Jirousková M, Coller BS. Blue R, et al. Among authors: murcia m. Blood. 2008 Feb 1;111(3):1248-56. doi: 10.1182/blood-2007-08-105544. Epub 2007 Oct 31. Blood. 2008. PMID: 17978171 Free PMC article.

6

Structural and therapeutic insights from the species specificity and in vivo antithrombotic activity of a novel alphaIIb-specific alphaIIbbeta3 antagonist.

Blue R, Kowalska MA, Hirsch J, Murcia M, Janczak CA, Harrington A, Jirouskova M, Li J, Fuentes R, Thornton MA, Filizola M, Poncz M, Coller BS. Blue R, et al. Among authors: murcia m. Blood. 2009 Jul 2;114(1):195-201. doi: 10.1182/blood-2008-08-169243. Epub 2009 May 4. Blood. 2009. PMID: 19414864 Free PMC article.

7

Requirements and ontology for a G protein-coupled receptor oligomerization knowledge base.

Skrabanek L, Murcia M, Bouvier M, Devi L, George SR, Lohse MJ, Milligan G, Neubig R, Palczewski K, Parmentier M, Pin JP, Vriend G, Javitch JA, Campagne F, Filizola M. Skrabanek L, et al. Among authors: murcia m. BMC Bioinformatics. 2007 May 30;8:177. doi: 10.1186/1471-2105-8-177. BMC Bioinformatics. 2007. PMID: 17537266 Free PMC article.

8

Gaussian mapping of chemical fragments in ligand binding sites.

Wang K, Murcia M, Constans P, Pérez C, Ortiz AR. Wang K, et al. Among authors: murcia m. J Comput Aided Mol Des. 2004 Feb;18(2):101-18. doi: 10.1023/b:jcam.0000030033.26053.40. J Comput Aided Mol Des. 2004. PMID: 15287697

9

Virtual screening with flexible docking and COMBINE-based models. Application to a series of factor Xa inhibitors.

Murcia M, Ortiz AR. Murcia M, et al. J Med Chem. 2004 Feb 12;47(4):805-20. doi: 10.1021/jm030137a. J Med Chem. 2004. PMID: 14761183

10

Comparative binding energy analysis considering multiple receptors: a step toward 3D-QSAR models for multiple targets.

Murcia M, Morreale A, Ortiz AR. Murcia M, et al. J Med Chem. 2006 Oct 19;49(21):6241-53. doi: 10.1021/jm060350h. J Med Chem. 2006. PMID: 17034130

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