Klauda JB - Search Results

1

Collective and noncollective models of NMR relaxation in lipid vesicles and multilayers.

Klauda JB, Eldho NV, Gawrisch K, Brooks BR, Pastor RW. Klauda JB, et al. J Phys Chem B. 2008 May 15;112(19):5924-9. doi: 10.1021/jp075641w. Epub 2008 Jan 8. J Phys Chem B. 2008. PMID: 18179193

2

Understanding how transmembrane domains regulate interactions between human BST-2 and the SARS-CoV-2 accessory protein ORF7a.

Mann MM, Hsieh MK, Tang JD, Hart WS, Lazzara MJ, Klauda JB, Berger BW. Mann MM, et al. Among authors: klauda jb. Biochim Biophys Acta Biomembr. 2023 Aug;1865(6):184174. doi: 10.1016/j.bbamem.2023.184174. Epub 2023 May 19. Biochim Biophys Acta Biomembr. 2023. PMID: 37211321 Free PMC article.

3

Simulations of naïve and KLA-activated macrophage plasma membrane models.

Niu Y, Chen SJ, Klauda JB. Niu Y, et al. Among authors: klauda jb. Biochim Biophys Acta Biomembr. 2024 Jan;1866(1):184242. doi: 10.1016/j.bbamem.2023.184242. Epub 2023 Oct 21. Biochim Biophys Acta Biomembr. 2024. PMID: 37866689 Free article.

4

Simulation-based methods for interpreting x-ray data from lipid bilayers.

Klauda JB, Kucerka N, Brooks BR, Pastor RW, Nagle JF. Klauda JB, et al. Biophys J. 2006 Apr 15;90(8):2796-807. doi: 10.1529/biophysj.105.075697. Epub 2006 Jan 27. Biophys J. 2006. PMID: 16443652 Free PMC article.

5

Adjacent gauche stabilization in linear alkanes: implications for polymer models and conformational analysis.

Klauda JB, Pastor RW, Brooks BR. Klauda JB, et al. J Phys Chem B. 2005 Aug 25;109(33):15684-6. doi: 10.1021/jp0527608. J Phys Chem B. 2005. PMID: 16852989 Free PMC article.

6

An ab initio study on the torsional surface of alkanes and its effect on molecular simulations of alkanes and a DPPC bilayer.

Klauda JB, Brooks BR, MacKerell AD Jr, Venable RM, Pastor RW. Klauda JB, et al. J Phys Chem B. 2005 Mar 24;109(11):5300-11. doi: 10.1021/jp0468096. J Phys Chem B. 2005. PMID: 16863197

7

Dynamical motions of lipids and a finite size effect in simulations of bilayers.

Klauda JB, Brooks BR, Pastor RW. Klauda JB, et al. J Chem Phys. 2006 Oct 14;125(14):144710. doi: 10.1063/1.2354486. J Chem Phys. 2006. PMID: 17042634 Free PMC article.

8

Sugar binding in lactose permease: anomeric state of a disaccharide influences binding structure.

Klauda JB, Brooks BR. Klauda JB, et al. J Mol Biol. 2007 Apr 13;367(5):1523-34. doi: 10.1016/j.jmb.2007.02.001. Epub 2007 Feb 7. J Mol Biol. 2007. PMID: 17320103 Free PMC article.

9

Long-range Lennard-Jones and electrostatic interactions in interfaces: application of the isotropic periodic sum method.

Klauda JB, Wu X, Pastor RW, Brooks BR. Klauda JB, et al. J Phys Chem B. 2007 May 3;111(17):4393-400. doi: 10.1021/jp068767m. Epub 2007 Apr 11. J Phys Chem B. 2007. PMID: 17425357 Free PMC article.

10

Rotation of lipids in membranes: molecular dynamics simulation, 31P spin-lattice relaxation, and rigid-body dynamics.

Klauda JB, Roberts MF, Redfield AG, Brooks BR, Pastor RW. Klauda JB, et al. Biophys J. 2008 Apr 15;94(8):3074-83. doi: 10.1529/biophysj.107.121806. Epub 2008 Jan 11. Biophys J. 2008. PMID: 18192349 Free PMC article.

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