Friesner RA - Search Results

1

Toward better refinement of comparative models: predicting loops in inexact environments.

Sellers BD, Zhu K, Zhao S, Friesner RA, Jacobson MP. Sellers BD, et al. Among authors: friesner ra. Proteins. 2008 Aug 15;72(3):959-71. doi: 10.1002/prot.21990. Proteins. 2008. PMID: 18300241 Free PMC article.

2

Protein structure prediction using a combination of sequence-based alignment, constrained energy minimization, and structural alignment.

Standley DM, Eyrich VA, An Y, Pincus DL, Gunn JR, Friesner RA. Standley DM, et al. Among authors: friesner ra. Proteins. 2001;Suppl 5:133-9. doi: 10.1002/prot.10005. Proteins. 2001. PMID: 11835490

3

On the role of the crystal environment in determining protein side-chain conformations.

Jacobson MP, Friesner RA, Xiang Z, Honig B. Jacobson MP, et al. Among authors: friesner ra. J Mol Biol. 2002 Jul 12;320(3):597-608. doi: 10.1016/s0022-2836(02)00470-9. J Mol Biol. 2002. PMID: 12096912

4

A novel fold recognition method using composite predicted secondary structures.

An Y, Friesner RA. An Y, et al. Among authors: friesner ra. Proteins. 2002 Aug 1;48(2):352-66. doi: 10.1002/prot.10145. Proteins. 2002. PMID: 12112702

5

Complete protein structure determination using backbone residual dipolar couplings and sidechain rotamer prediction.

Andrec M, Harano Y, Jacobson MP, Friesner RA, Levy RM. Andrec M, et al. Among authors: friesner ra. J Struct Funct Genomics. 2002;2(2):103-11. doi: 10.1023/a:1020435630054. J Struct Funct Genomics. 2002. PMID: 12836667

6

A hierarchical approach to all-atom protein loop prediction.

Jacobson MP, Pincus DL, Rapp CS, Day TJ, Honig B, Shaw DE, Friesner RA. Jacobson MP, et al. Among authors: friesner ra. Proteins. 2004 May 1;55(2):351-67. doi: 10.1002/prot.10613. Proteins. 2004. PMID: 15048827

7

High-resolution prediction of protein helix positions and orientations.

Li X, Jacobson MP, Friesner RA. Li X, et al. Among authors: friesner ra. Proteins. 2004 May 1;55(2):368-82. doi: 10.1002/prot.20014. Proteins. 2004. PMID: 15048828

8

What role do surfaces play in GB models? A new-generation of surface-generalized born model based on a novel gaussian surface for biomolecules.

Yu Z, Jacobson MP, Friesner RA. Yu Z, et al. Among authors: friesner ra. J Comput Chem. 2006 Jan 15;27(1):72-89. doi: 10.1002/jcc.20307. J Comput Chem. 2006. PMID: 16261581 Free PMC article.

9

Novel procedure for modeling ligand/receptor induced fit effects.

Sherman W, Day T, Jacobson MP, Friesner RA, Farid R. Sherman W, et al. Among authors: friesner ra. J Med Chem. 2006 Jan 26;49(2):534-53. doi: 10.1021/jm050540c. J Med Chem. 2006. PMID: 16420040

10

Long loop prediction using the protein local optimization program.

Zhu K, Pincus DL, Zhao S, Friesner RA. Zhu K, et al. Among authors: friesner ra. Proteins. 2006 Nov 1;65(2):438-52. doi: 10.1002/prot.21040. Proteins. 2006. PMID: 16927380

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