Pascual-Montano A - Search Results

1

ChIPCodis: mining complex regulatory systems in yeast by concurrent enrichment analysis of chip-on-chip data.

Abascal F, Carmona-Saez P, Carazo JM, Pascual-Montano A. Abascal F, et al. Bioinformatics. 2008 May 1;24(9):1208-9. doi: 10.1093/bioinformatics/btn094. Epub 2008 Mar 12. Bioinformatics. 2008. PMID: 18339638

2

A novel neural network technique for analysis and classification of EM single-particle images.

Pascual-Montano A, Donate LE, Valle M, Bárcena M, Pascual-Marqui RD, Carazo JM. Pascual-Montano A, et al. J Struct Biol. 2001 Feb-Mar;133(2-3):233-45. doi: 10.1006/jsbi.2001.4369. J Struct Biol. 2001. PMID: 11472094

3

Engene: the processing and exploratory analysis of gene expression data.

García de la Nava J, Santaella DF, Cuenca Alba J, María Carazo J, Trelles O, Pascual-Montano A. García de la Nava J, et al. Bioinformatics. 2003 Mar 22;19(5):657-8. doi: 10.1093/bioinformatics/btg028. Bioinformatics. 2003. PMID: 12651727

4

XMIPP: a new generation of an open-source image processing package for electron microscopy.

Sorzano CO, Marabini R, Velázquez-Muriel J, Bilbao-Castro JR, Scheres SH, Carazo JM, Pascual-Montano A. Sorzano CO, et al. J Struct Biol. 2004 Nov;148(2):194-204. doi: 10.1016/j.jsb.2004.06.006. J Struct Biol. 2004. PMID: 15477099

5

Discovering semantic features in the literature: a foundation for building functional associations.

Chagoyen M, Carmona-Saez P, Shatkay H, Carazo JM, Pascual-Montano A. Chagoyen M, et al. BMC Bioinformatics. 2006 Jan 26;7:41. doi: 10.1186/1471-2105-7-41. BMC Bioinformatics. 2006. PMID: 16438716 Free PMC article.

6

Integrated analysis of gene expression by Association Rules Discovery.

Carmona-Saez P, Chagoyen M, Rodriguez A, Trelles O, Carazo JM, Pascual-Montano A. Carmona-Saez P, et al. BMC Bioinformatics. 2006 Feb 7;7:54. doi: 10.1186/1471-2105-7-54. BMC Bioinformatics. 2006. PMID: 16464256 Free PMC article.

7

Biclustering of gene expression data by Non-smooth Non-negative Matrix Factorization.

Carmona-Saez P, Pascual-Marqui RD, Tirado F, Carazo JM, Pascual-Montano A. Carmona-Saez P, et al. BMC Bioinformatics. 2006 Feb 17;7:78. doi: 10.1186/1471-2105-7-78. BMC Bioinformatics. 2006. PMID: 16503973 Free PMC article.

8

Nonsmooth nonnegative matrix factorization (nsNMF).

Pascual-Montano A, Carazo JM, Kochi K, Lehmann D, Pascual-Marqui RD. Pascual-Montano A, et al. IEEE Trans Pattern Anal Mach Intell. 2006 Mar;28(3):403-15. doi: 10.1109/TPAMI.2006.60. IEEE Trans Pattern Anal Mach Intell. 2006. PMID: 16526426

9

A literature-based similarity metric for biological processes.

Chagoyen M, Carmona-Saez P, Gil C, Carazo JM, Pascual-Montano A. Chagoyen M, et al. BMC Bioinformatics. 2006 Jul 26;7:363. doi: 10.1186/1471-2105-7-363. BMC Bioinformatics. 2006. PMID: 16872502 Free PMC article.

10

bioNMF: a versatile tool for non-negative matrix factorization in biology.

Pascual-Montano A, Carmona-Saez P, Chagoyen M, Tirado F, Carazo JM, Pascual-Marqui RD. Pascual-Montano A, et al. BMC Bioinformatics. 2006 Jul 28;7:366. doi: 10.1186/1471-2105-7-366. BMC Bioinformatics. 2006. PMID: 16875499 Free PMC article.

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