Rebholz-Schuhmann D - Search Results

1

Gene Regulation Ontology (GRO): design principles and use cases.

Beisswanger E, Lee V, Kim JJ, Rebholz-Schuhmann D, Splendiani A, Dameron O, Schulz S, Hahn U. Beisswanger E, et al. Stud Health Technol Inform. 2008;136:9-14. Stud Health Technol Inform. 2008. PMID: 18487700

2

Categorization of services for seeking information in biomedical literature: a typology for improvement of practice.

Kim JJ, Rebholz-Schuhmann D. Kim JJ, et al. Brief Bioinform. 2008 Nov;9(6):452-65. doi: 10.1093/bib/bbn032. Epub 2008 Jul 26. Brief Bioinform. 2008. PMID: 18660511

3

Improving the extraction of complex regulatory events from scientific text by using ontology-based inference.

Kim JJ, Rebholz-Schuhmann D. Kim JJ, et al. J Biomed Semantics. 2011 Oct 6;2 Suppl 5(Suppl 5):S3. doi: 10.1186/2041-1480-2-S5-S3. J Biomed Semantics. 2011. PMID: 22166672 Free PMC article.

4

Extending the evaluation of Genia Event task toward knowledge base construction and comparison to Gene Regulation Ontology task.

Kim JD, Kim JJ, Han X, Rebholz-Schuhmann D. Kim JD, et al. BMC Bioinformatics. 2015;16 Suppl 10(Suppl 10):S3. doi: 10.1186/1471-2105-16-S10-S3. Epub 2015 Jul 13. BMC Bioinformatics. 2015. PMID: 26202680 Free PMC article.

5

MedEvi: retrieving textual evidence of relations between biomedical concepts from Medline.

Kim JJ, Pezik P, Rebholz-Schuhmann D. Kim JJ, et al. Bioinformatics. 2008 Jun 1;24(11):1410-2. doi: 10.1093/bioinformatics/btn117. Epub 2008 Apr 9. Bioinformatics. 2008. PMID: 18400773 Free PMC article.

6

CALBC silver standard corpus.

Rebholz-Schuhmann D, Jimeno Yepes AJ, Van Mulligen EM, Kang N, Kors J, Milward D, Corbett P, Buyko E, Beisswanger E, Hahn U. Rebholz-Schuhmann D, et al. J Bioinform Comput Biol. 2010 Feb;8(1):163-79. doi: 10.1142/s0219720010004562. J Bioinform Comput Biol. 2010. PMID: 20183881

7

Assessment of disease named entity recognition on a corpus of annotated sentences.

Jimeno A, Jimenez-Ruiz E, Lee V, Gaudan S, Berlanga R, Rebholz-Schuhmann D. Jimeno A, et al. BMC Bioinformatics. 2008 Apr 11;9 Suppl 3(Suppl 3):S3. doi: 10.1186/1471-2105-9-S3-S3. BMC Bioinformatics. 2008. PMID: 18426548 Free PMC article.

8

Combining evidence, specificity, and proximity towards the normalization of Gene Ontology terms in text.

Gaudan S, Jimeno Yepes A, Lee V, Rebholz-Schuhmann D. Gaudan S, et al. EURASIP J Bioinform Syst Biol. 2008;2008(1):342746. doi: 10.1155/2008/342746. EURASIP J Bioinform Syst Biol. 2008. PMID: 18437221 Free PMC article.

9

MeSH Up: effective MeSH text classification for improved document retrieval.

Trieschnigg D, Pezik P, Lee V, de Jong F, Kraaij W, Rebholz-Schuhmann D. Trieschnigg D, et al. Bioinformatics. 2009 Jun 1;25(11):1412-8. doi: 10.1093/bioinformatics/btp249. Epub 2009 Apr 17. Bioinformatics. 2009. PMID: 19376821 Free PMC article.

10

The BioLexicon: a large-scale terminological resource for biomedical text mining.

Thompson P, McNaught J, Montemagni S, Calzolari N, del Gratta R, Lee V, Marchi S, Monachini M, Pezik P, Quochi V, Rupp CJ, Sasaki Y, Venturi G, Rebholz-Schuhmann D, Ananiadou S. Thompson P, et al. BMC Bioinformatics. 2011 Oct 12;12:397. doi: 10.1186/1471-2105-12-397. BMC Bioinformatics. 2011. PMID: 21992002 Free PMC article.

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