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Page 1
PhosphoPep--a database of protein phosphorylation sites in model organisms.
Bodenmiller B, Campbell D, Gerrits B, Lam H, Jovanovic M, Picotti P, Schlapbach R, Aebersold R. Bodenmiller B, et al. Among authors: schlapbach r. Nat Biotechnol. 2008 Dec;26(12):1339-40. doi: 10.1038/nbt1208-1339. Nat Biotechnol. 2008. PMID: 19060867 Free PMC article. No abstract available.
PhosphoPep--a phosphoproteome resource for systems biology research in Drosophila Kc167 cells.
Bodenmiller B, Malmstrom J, Gerrits B, Campbell D, Lam H, Schmidt A, Rinner O, Mueller LN, Shannon PT, Pedrioli PG, Panse C, Lee HK, Schlapbach R, Aebersold R. Bodenmiller B, et al. Among authors: schlapbach r. Mol Syst Biol. 2007;3:139. doi: 10.1038/msb4100182. Epub 2007 Oct 16. Mol Syst Biol. 2007. PMID: 17940529 Free PMC article. Review.
A high-quality catalog of the Drosophila melanogaster proteome.
Brunner E, Ahrens CH, Mohanty S, Baetschmann H, Loevenich S, Potthast F, Deutsch EW, Panse C, de Lichtenberg U, Rinner O, Lee H, Pedrioli PG, Malmstrom J, Koehler K, Schrimpf S, Krijgsveld J, Kregenow F, Heck AJ, Hafen E, Schlapbach R, Aebersold R. Brunner E, et al. Among authors: schlapbach r. Nat Biotechnol. 2007 May;25(5):576-83. doi: 10.1038/nbt1300. Epub 2007 Apr 22. Nat Biotechnol. 2007. PMID: 17450130
Phosphoproteomic analysis reveals interconnected system-wide responses to perturbations of kinases and phosphatases in yeast.
Bodenmiller B, Wanka S, Kraft C, Urban J, Campbell D, Pedrioli PG, Gerrits B, Picotti P, Lam H, Vitek O, Brusniak MY, Roschitzki B, Zhang C, Shokat KM, Schlapbach R, Colman-Lerner A, Nolan GP, Nesvizhskii AI, Peter M, Loewith R, von Mering C, Aebersold R. Bodenmiller B, et al. Among authors: schlapbach r. Sci Signal. 2010 Dec 21;3(153):rs4. doi: 10.1126/scisignal.2001182. Sci Signal. 2010. PMID: 21177495 Free PMC article.
Qualitative and quantitative analyses of protein phosphorylation in naive and stimulated mouse synaptosomal preparations.
Munton RP, Tweedie-Cullen R, Livingstone-Zatchej M, Weinandy F, Waidelich M, Longo D, Gehrig P, Potthast F, Rutishauser D, Gerrits B, Panse C, Schlapbach R, Mansuy IM. Munton RP, et al. Among authors: schlapbach r. Mol Cell Proteomics. 2007 Feb;6(2):283-93. doi: 10.1074/mcp.M600046-MCP200. Epub 2006 Nov 17. Mol Cell Proteomics. 2007. PMID: 17114649 Free article.
The Mass Distance Fingerprint: a statistical framework for de novo detection of predominant modifications using high-accuracy mass spectrometry.
Potthast F, Gerrits B, Häkkinen J, Rutishauser D, Ahrens CH, Roschitzki B, Baerenfaller K, Munton RP, Walther P, Gehrig P, Seif P, Seeberger PH, Schlapbach R. Potthast F, et al. Among authors: schlapbach r. J Chromatogr B Analyt Technol Biomed Life Sci. 2007 Jul 1;854(1-2):173-82. doi: 10.1016/j.jchromb.2007.04.020. Epub 2007 Apr 25. J Chromatogr B Analyt Technol Biomed Life Sci. 2007. PMID: 17513179
Multi-laboratory assessment of reproducibility, qualitative and quantitative performance of SWATH-mass spectrometry.
Collins BC, Hunter CL, Liu Y, Schilling B, Rosenberger G, Bader SL, Chan DW, Gibson BW, Gingras AC, Held JM, Hirayama-Kurogi M, Hou G, Krisp C, Larsen B, Lin L, Liu S, Molloy MP, Moritz RL, Ohtsuki S, Schlapbach R, Selevsek N, Thomas SN, Tzeng SC, Zhang H, Aebersold R. Collins BC, et al. Among authors: schlapbach r. Nat Commun. 2017 Aug 21;8(1):291. doi: 10.1038/s41467-017-00249-5. Nat Commun. 2017. PMID: 28827567 Free PMC article.
The SysteMHC Atlas project.
Shao W, Pedrioli PGA, Wolski W, Scurtescu C, Schmid E, Vizcaíno JA, Courcelles M, Schuster H, Kowalewski D, Marino F, Arlehamn CSL, Vaughan K, Peters B, Sette A, Ottenhoff THM, Meijgaarden KE, Nieuwenhuizen N, Kaufmann SHE, Schlapbach R, Castle JC, Nesvizhskii AI, Nielsen M, Deutsch EW, Campbell DS, Moritz RL, Zubarev RA, Ytterberg AJ, Purcell AW, Marcilla M, Paradela A, Wang Q, Costello CE, Ternette N, van Veelen PA, van Els CACM, Heck AJR, de Souza GA, Sollid LM, Admon A, Stevanovic S, Rammensee HG, Thibault P, Perreault C, Bassani-Sternberg M, Aebersold R, Caron E. Shao W, et al. Among authors: schlapbach r. Nucleic Acids Res. 2018 Jan 4;46(D1):D1237-D1247. doi: 10.1093/nar/gkx664. Nucleic Acids Res. 2018. PMID: 28985418 Free PMC article.
Precise Temporal Profiling of Signaling Complexes in Primary Cells Using SWATH Mass Spectrometry.
Caron E, Roncagalli R, Hase T, Wolski WE, Choi M, Menoita MG, Durand S, García-Blesa A, Fierro-Monti I, Sajic T, Heusel M, Weiss T, Malissen M, Schlapbach R, Collins BC, Ghosh S, Kitano H, Aebersold R, Malissen B, Gstaiger M. Caron E, et al. Among authors: schlapbach r. Cell Rep. 2017 Mar 28;18(13):3219-3226. doi: 10.1016/j.celrep.2017.03.019. Cell Rep. 2017. PMID: 28355572 Free PMC article.
109 results