Sakurai M - Search Results

1

Fragment molecular orbital calculations on red fluorescent proteins (DsRed and mFruits).

Taguchi N, Mochizuki Y, Nakano T, Amari S, Fukuzawa K, Ishikawa T, Sakurai M, Tanaka S. Taguchi N, et al. Among authors: sakurai m. J Phys Chem B. 2009 Jan 29;113(4):1153-61. doi: 10.1021/jp808151c. J Phys Chem B. 2009. PMID: 19127982

2

Crystal structure of an anhydrous form of trehalose: structure of water channels of trehalose polymorphism.

Nagase H, Ogawa N, Endo T, Shiro M, Ueda H, Sakurai M. Nagase H, et al. Among authors: sakurai m. J Phys Chem B. 2008 Jul 31;112(30):9105-11. doi: 10.1021/jp800936z. Epub 2008 Jul 8. J Phys Chem B. 2008. PMID: 18605683

3

Linear-scaling molecular orbital calculations for the pKa values of ionizable residues in proteins.

Ohno K, Sakurai M. Ohno K, et al. Among authors: sakurai m. J Comput Chem. 2006 May;27(7):906-16. doi: 10.1002/jcc.20372. J Comput Chem. 2006. PMID: 16550537

4

Unrestricted density functional theory based on the fragment molecular orbital method for the ground and excited state calculations of large systems.

Nakata H, Fedorov DG, Yokojima S, Kitaura K, Sakurai M, Nakamura S. Nakata H, et al. Among authors: sakurai m. J Chem Phys. 2014 Apr 14;140(14):144101. doi: 10.1063/1.4870261. J Chem Phys. 2014. PMID: 24735282

5

ATP Hydrolysis Mechanism in a Maltose Transporter Explored by QM/MM Metadynamics Simulation.

Hsu WL, Furuta T, Sakurai M. Hsu WL, et al. Among authors: sakurai m. J Phys Chem B. 2016 Nov 3;120(43):11102-11112. doi: 10.1021/acs.jpcb.6b07332. Epub 2016 Oct 21. J Phys Chem B. 2016. PMID: 27712074

6

Experimental and theoretical study on the intermolecular complex formation between trehalose and benzene compounds in aqueous solution.

Sakakura K, Okabe A, Oku K, Sakurai M. Sakakura K, et al. Among authors: sakurai m. J Phys Chem B. 2011 Aug 18;115(32):9823-30. doi: 10.1021/jp2037203. Epub 2011 Jul 22. J Phys Chem B. 2011. PMID: 21740054

7

ATP-induced conformational changes of nucleotide-binding domains in an ABC transporter. Importance of the water-mediated entropic force.

Hayashi T, Chiba S, Kaneta Y, Furuta T, Sakurai M. Hayashi T, et al. Among authors: sakurai m. J Phys Chem B. 2014 Nov 6;118(44):12612-20. doi: 10.1021/jp507930e. Epub 2014 Oct 24. J Phys Chem B. 2014. PMID: 25302667

8

Natural DNA mixed with trehalose persists in B-form double-stranding even in the dry state.

Zhu B, Furuki T, Okuda T, Sakurai M. Zhu B, et al. Among authors: sakurai m. J Phys Chem B. 2007 May 24;111(20):5542-4. doi: 10.1021/jp071974h. Epub 2007 May 2. J Phys Chem B. 2007. PMID: 17472369

9

Combined NMR and quantum chemical studies on the interaction between trehalose and dienes relevant to the antioxidant function of trehalose.

Oku K, Kurose M, Kubota M, Fukuda S, Kurimoto M, Tujisaka Y, Okabe A, Sakurai M. Oku K, et al. Among authors: sakurai m. J Phys Chem B. 2005 Feb 24;109(7):3032-40. doi: 10.1021/jp045906w. J Phys Chem B. 2005. PMID: 16851317

In a previous study (Oku, K.; Watanabe, H.; Kubota, M.; Fukuda, S.; Kurimoto, M.; Tujisaka, Y.; Komori, M.; Inoue, Y.; Sakurai, M. J. Am. ...

In a previous study (Oku, K.; Watanabe, H.; Kubota, M.; Fukuda, S.; Kurimoto, M.; Tujisaka, Y.; Komori, M.; Inoue, Y.; …

10

The power stroke driven by ATP binding in CFTR as studied by molecular dynamics simulations.

Furukawa-Hagiya T, Furuta T, Chiba S, Sohma Y, Sakurai M. Furukawa-Hagiya T, et al. Among authors: sakurai m. J Phys Chem B. 2013 Jan 10;117(1):83-93. doi: 10.1021/jp308315w. Epub 2012 Dec 19. J Phys Chem B. 2013. PMID: 23214920

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