Nakamura H - Search Results

1

Zc3h12a is an RNase essential for controlling immune responses by regulating mRNA decay.

Matsushita K, Takeuchi O, Standley DM, Kumagai Y, Kawagoe T, Miyake T, Satoh T, Kato H, Tsujimura T, Nakamura H, Akira S. Matsushita K, et al. Among authors: nakamura h. Nature. 2009 Apr 30;458(7242):1185-90. doi: 10.1038/nature07924. Epub 2009 Mar 25. Nature. 2009. PMID: 19322177

2

Detecting local structural similarity in proteins by maximizing number of equivalent residues.

Standley DM, Toh H, Nakamura H. Standley DM, et al. Among authors: nakamura h. Proteins. 2004 Nov 1;57(2):381-91. doi: 10.1002/prot.20211. Proteins. 2004. PMID: 15340925

3

GASH: an improved algorithm for maximizing the number of equivalent residues between two protein structures.

Standley DM, Toh H, Nakamura H. Standley DM, et al. Among authors: nakamura h. BMC Bioinformatics. 2005 Sep 8;6:221. doi: 10.1186/1471-2105-6-221. BMC Bioinformatics. 2005. PMID: 16146579 Free PMC article.

4

Flexible docking of an amyloid-forming peptide from beta(2)-microglobulin.

Standley DM, Yonezawa Y, Goto Y, Nakamura H. Standley DM, et al. Among authors: nakamura h. FEBS Lett. 2006 Nov 13;580(26):6199-205. doi: 10.1016/j.febslet.2006.10.022. Epub 2006 Oct 18. FEBS Lett. 2006. PMID: 17069810 Free article.

5

Higher order structure contributes to specific differences in redox potential and electron transfer efficiency of root and leaf ferredoxins.

Gou P, Hanke GT, Kimata-Ariga Y, Standley DM, Kubo A, Taniguchi I, Nakamura H, Hase T. Gou P, et al. Among authors: nakamura h. Biochemistry. 2006 Dec 5;45(48):14389-96. doi: 10.1021/bi061779d. Biochemistry. 2006. PMID: 17128978

6

ASH structure alignment package: sensitivity and selectivity in domain classification.

Standley DM, Toh H, Nakamura H. Standley DM, et al. Among authors: nakamura h. BMC Bioinformatics. 2007 Apr 4;8:116. doi: 10.1186/1471-2105-8-116. BMC Bioinformatics. 2007. PMID: 17407606 Free PMC article.

7

Docking of protein molecular surfaces with evolutionary trace analysis.

Kanamori E, Murakami Y, Tsuchiya Y, Standley DM, Nakamura H, Kinoshita K. Kanamori E, et al. Among authors: nakamura h. Proteins. 2007 Dec 1;69(4):832-8. doi: 10.1002/prot.21737. Proteins. 2007. PMID: 17803239

8

Functional annotation by sequence-weighted structure alignments: statistical analysis and case studies from the Protein 3000 structural genomics project in Japan.

Standley DM, Toh H, Nakamura H. Standley DM, et al. Among authors: nakamura h. Proteins. 2008 Sep;72(4):1333-51. doi: 10.1002/prot.22015. Proteins. 2008. PMID: 18384072

9

[From structures to functions: annotation by structural bioinformatics].

Standley DM, Nakamura H. Standley DM, et al. Among authors: nakamura h. Tanpakushitsu Kakusan Koso. 2008 Apr;53(5):638-44. Tanpakushitsu Kakusan Koso. 2008. PMID: 18409555 Review. Japanese. No abstract available.

10

Protein structure databases with new web services for structural biology and biomedical research.

Standley DM, Kinjo AR, Kinoshita K, Nakamura H. Standley DM, et al. Among authors: nakamura h. Brief Bioinform. 2008 Jul;9(4):276-85. doi: 10.1093/bib/bbn015. Epub 2008 Apr 22. Brief Bioinform. 2008. PMID: 18430752 Review.

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