Szallasi Z - Search Results

1

Chromosomal instability determines taxane response.

Swanton C, Nicke B, Schuett M, Eklund AC, Ng C, Li Q, Hardcastle T, Lee A, Roy R, East P, Kschischo M, Endesfelder D, Wylie P, Kim SN, Chen JG, Howell M, Ried T, Habermann JK, Auer G, Brenton JD, Szallasi Z, Downward J. Swanton C, et al. Among authors: szallasi z. Proc Natl Acad Sci U S A. 2009 May 26;106(21):8671-6. doi: 10.1073/pnas.0811835106. Epub 2009 May 19. Proc Natl Acad Sci U S A. 2009. PMID: 19458043 Free PMC article.

2

Redefinition of Affymetrix probe sets by sequence overlap with cDNA microarray probes reduces cross-platform inconsistencies in cancer-associated gene expression measurements.

Carter SL, Eklund AC, Mecham BH, Kohane IS, Szallasi Z. Carter SL, et al. Among authors: szallasi z. BMC Bioinformatics. 2005 Apr 25;6:107. doi: 10.1186/1471-2105-6-107. BMC Bioinformatics. 2005. PMID: 15850491 Free PMC article.

3

Reliability and reproducibility issues in DNA microarray measurements.

Draghici S, Khatri P, Eklund AC, Szallasi Z. Draghici S, et al. Among authors: szallasi z. Trends Genet. 2006 Feb;22(2):101-9. doi: 10.1016/j.tig.2005.12.005. Epub 2005 Dec 27. Trends Genet. 2006. PMID: 16380191 Free PMC article. Review.

4

A signature of chromosomal instability inferred from gene expression profiles predicts clinical outcome in multiple human cancers.

Carter SL, Eklund AC, Kohane IS, Harris LN, Szallasi Z. Carter SL, et al. Among authors: szallasi z. Nat Genet. 2006 Sep;38(9):1043-8. doi: 10.1038/ng1861. Epub 2006 Aug 20. Nat Genet. 2006. PMID: 16921376

5

Correction of technical bias in clinical microarray data improves concordance with known biological information.

Eklund AC, Szallasi Z. Eklund AC, et al. Among authors: szallasi z. Genome Biol. 2008;9(2):R26. doi: 10.1186/gb-2008-9-2-r26. Epub 2008 Feb 4. Genome Biol. 2008. PMID: 18248669 Free PMC article.

6

Functional genomic analysis of drug sensitivity pathways to guide adjuvant strategies in breast cancer.

Swanton C, Szallasi Z, Brenton JD, Downward J. Swanton C, et al. Among authors: szallasi z. Breast Cancer Res. 2008;10(5):214. doi: 10.1186/bcr2159. Epub 2008 Oct 31. Breast Cancer Res. 2008. PMID: 18986507 Free PMC article. Review.

7

Concordance of exon array and real-time PCR assessment of gene expression following cancer cell cytotoxic drug exposure.

Lee AJ, East P, Pepper S, Nicke B, Szallasi Z, Eklund AC, Downward J, Swanton C. Lee AJ, et al. Among authors: szallasi z. Cell Cycle. 2008 Dec 15;7(24):3947-8. doi: 10.4161/cc.7.24.7217. Epub 2008 Dec 17. Cell Cycle. 2008. PMID: 19066460 No abstract available.

8

A large-scale analysis of tissue-specific pathology and gene expression of human disease genes and complexes.

Lage K, Hansen NT, Karlberg EO, Eklund AC, Roque FS, Donahoe PK, Szallasi Z, Jensen TS, Brunak S. Lage K, et al. Among authors: szallasi z. Proc Natl Acad Sci U S A. 2008 Dec 30;105(52):20870-5. doi: 10.1073/pnas.0810772105. Epub 2008 Dec 22. Proc Natl Acad Sci U S A. 2008. PMID: 19104045 Free PMC article.

9

Evaluation of microarray preprocessing algorithms based on concordance with RT-PCR in clinical samples.

Gyorffy B, Molnar B, Lage H, Szallasi Z, Eklund AC. Gyorffy B, et al. Among authors: szallasi z. PLoS One. 2009 May 21;4(5):e5645. doi: 10.1371/journal.pone.0005645. PLoS One. 2009. PMID: 19461970 Free PMC article.

10

Optimization of the BLASTN substitution matrix for prediction of non-specific DNA microarray hybridization.

Eklund AC, Friis P, Wernersson R, Szallasi Z. Eklund AC, et al. Among authors: szallasi z. Nucleic Acids Res. 2010 Mar;38(4):e27. doi: 10.1093/nar/gkp1116. Epub 2009 Dec 6. Nucleic Acids Res. 2010. PMID: 19969549 Free PMC article.

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