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Page 1
Lineage-specific biology revealed by a finished genome assembly of the mouse.
Church DM, Goodstadt L, Hillier LW, Zody MC, Goldstein S, She X, Bult CJ, Agarwala R, Cherry JL, DiCuccio M, Hlavina W, Kapustin Y, Meric P, Maglott D, Birtle Z, Marques AC, Graves T, Zhou S, Teague B, Potamousis K, Churas C, Place M, Herschleb J, Runnheim R, Forrest D, Amos-Landgraf J, Schwartz DC, Cheng Z, Lindblad-Toh K, Eichler EE, Ponting CP; Mouse Genome Sequencing Consortium. Church DM, et al. Among authors: potamousis k. PLoS Biol. 2009 May 5;7(5):e1000112. doi: 10.1371/journal.pbio.1000112. Epub 2009 May 26. PLoS Biol. 2009. PMID: 19468303 Free PMC article.
A clone-free, single molecule map of the domestic cow (Bos taurus) genome.
Zhou S, Goldstein S, Place M, Bechner M, Patino D, Potamousis K, Ravindran P, Pape L, Rincon G, Hernandez-Ortiz J, Medrano JF, Schwartz DC. Zhou S, et al. Among authors: potamousis k. BMC Genomics. 2015 Aug 28;16(1):644. doi: 10.1186/s12864-015-1823-7. BMC Genomics. 2015. PMID: 26314885 Free PMC article.
A single molecule scaffold for the maize genome.
Zhou S, Wei F, Nguyen J, Bechner M, Potamousis K, Goldstein S, Pape L, Mehan MR, Churas C, Pasternak S, Forrest DK, Wise R, Ware D, Wing RA, Waterman MS, Livny M, Schwartz DC. Zhou S, et al. Among authors: potamousis k. PLoS Genet. 2009 Nov;5(11):e1000711. doi: 10.1371/journal.pgen.1000711. Epub 2009 Nov 20. PLoS Genet. 2009. PMID: 19936062 Free PMC article.
High-resolution human genome structure by single-molecule analysis.
Teague B, Waterman MS, Goldstein S, Potamousis K, Zhou S, Reslewic S, Sarkar D, Valouev A, Churas C, Kidd JM, Kohn S, Runnheim R, Lamers C, Forrest D, Newton MA, Eichler EE, Kent-First M, Surti U, Livny M, Schwartz DC. Teague B, et al. Among authors: potamousis k. Proc Natl Acad Sci U S A. 2010 Jun 15;107(24):10848-53. doi: 10.1073/pnas.0914638107. Epub 2010 Jun 1. Proc Natl Acad Sci U S A. 2010. PMID: 20534489 Free PMC article.
Optical mapping discerns genome wide DNA methylation profiles.
Ananiev GE, Goldstein S, Runnheim R, Forrest DK, Zhou S, Potamousis K, Churas CP, Bergendahl V, Thomson JA, Schwartz DC. Ananiev GE, et al. Among authors: potamousis k. BMC Mol Biol. 2008 Jul 30;9:68. doi: 10.1186/1471-2199-9-68. BMC Mol Biol. 2008. PMID: 18667073 Free PMC article.
Single-molecule analysis reveals widespread structural variation in multiple myeloma.
Gupta A, Place M, Goldstein S, Sarkar D, Zhou S, Potamousis K, Kim J, Flanagan C, Li Y, Newton MA, Callander NS, Hematti P, Bresnick EH, Ma J, Asimakopoulos F, Schwartz DC. Gupta A, et al. Among authors: potamousis k. Proc Natl Acad Sci U S A. 2015 Jun 23;112(25):7689-94. doi: 10.1073/pnas.1418577112. Epub 2015 Jun 8. Proc Natl Acad Sci U S A. 2015. PMID: 26056298 Free PMC article.
Electrostatic confinement and manipulation of DNA molecules for genome analysis.
Kounovsky-Shafer KL, Hernandez-Ortiz JP, Potamousis K, Tsvid G, Place M, Ravindran P, Jo K, Zhou S, Odijk T, de Pablo JJ, Schwartz DC. Kounovsky-Shafer KL, et al. Among authors: potamousis k. Proc Natl Acad Sci U S A. 2017 Dec 19;114(51):13400-13405. doi: 10.1073/pnas.1711069114. Epub 2017 Dec 4. Proc Natl Acad Sci U S A. 2017. PMID: 29203667 Free PMC article.
Shotgun optical maps of the whole Escherichia coli O157:H7 genome.
Lim A, Dimalanta ET, Potamousis KD, Yen G, Apodoca J, Tao C, Lin J, Qi R, Skiadas J, Ramanathan A, Perna NT, Plunkett G 3rd, Burland V, Mau B, Hackett J, Blattner FR, Anantharaman TS, Mishra B, Schwartz DC. Lim A, et al. Among authors: potamousis kd. Genome Res. 2001 Sep;11(9):1584-93. doi: 10.1101/gr.172101. Genome Res. 2001. PMID: 11544203 Free PMC article.
12 results