Barakat KH - Search Results

1

Characterization of an inhibitory dynamic pharmacophore for the ERCC1-XPA interaction using a combined molecular dynamics and virtual screening approach.

Barakat KH, Torin Huzil J, Luchko T, Jordheim L, Dumontet C, Tuszynski J. Barakat KH, et al. J Mol Graph Model. 2009 Sep;28(2):113-30. doi: 10.1016/j.jmgm.2009.04.009. Epub 2009 May 4. J Mol Graph Model. 2009. PMID: 19473860

2

Electrostatic contributions to colchicine binding within tubulin isotypes.

Huzil JT, Barakat K, Tuszynski JA. Huzil JT, et al. Electromagn Biol Med. 2009;28(4):355-64. doi: 10.3109/15368370903206606. Electromagn Biol Med. 2009. PMID: 20017626

3

Ensemble-based virtual screening reveals dual-inhibitors for the p53-MDM2/MDMX interactions.

Barakat K, Mane J, Friesen D, Tuszynski J. Barakat K, et al. J Mol Graph Model. 2010 Feb 26;28(6):555-68. doi: 10.1016/j.jmgm.2009.12.003. Epub 2009 Dec 14. J Mol Graph Model. 2010. PMID: 20056466

4

Discovery and characterization of the laulimalide-microtubule binding mode by mass shift perturbation mapping.

Bennett MJ, Barakat K, Huzil JT, Tuszynski J, Schriemer DC. Bennett MJ, et al. Chem Biol. 2010 Jul 30;17(7):725-34. doi: 10.1016/j.chembiol.2010.05.019. Chem Biol. 2010. PMID: 20659685

5

Relaxed complex scheme suggests novel inhibitors for the lyase activity of DNA polymerase beta.

Barakat K, Tuszynski J. Barakat K, et al. J Mol Graph Model. 2011 Feb;29(5):702-16. doi: 10.1016/j.jmgm.2010.12.003. Epub 2010 Dec 13. J Mol Graph Model. 2011. PMID: 21194999

6

Effects of temperature on the p53-DNA binding interactions and their dynamical behavior: comparing the wild type to the R248Q mutant.

Barakat K, Issack BB, Stepanova M, Tuszynski J. Barakat K, et al. PLoS One. 2011;6(11):e27651. doi: 10.1371/journal.pone.0027651. Epub 2011 Nov 16. PLoS One. 2011. PMID: 22110706 Free PMC article.

7

Discovery of small molecule inhibitors that interact with γ-tubulin.

Friesen DE, Barakat KH, Semenchenko V, Perez-Pineiro R, Fenske BW, Mane J, Wishart DS, Tuszynski JA. Friesen DE, et al. Among authors: barakat kh. Chem Biol Drug Des. 2012 May;79(5):639-52. doi: 10.1111/j.1747-0285.2012.01340.x. Epub 2012 Feb 15. Chem Biol Drug Des. 2012. PMID: 22268380

8

DNA polymerase beta (pol β) inhibitors: a comprehensive overview.

Barakat KH, Gajewski MM, Tuszynski JA. Barakat KH, et al. Drug Discov Today. 2012 Aug;17(15-16):913-20. doi: 10.1016/j.drudis.2012.04.008. Epub 2012 Apr 25. Drug Discov Today. 2012. PMID: 22561893 Review.

9

DNA Repair Inhibitors: Our Last Disposal to Improve Cancer Therapy.

Barakat K, Gajewski M, Tuszynski J. Barakat K, et al. Curr Top Med Chem. 2012 Jun 7. Online ahead of print. Curr Top Med Chem. 2012. PMID: 22690684

10

Computational predictions of volatile anesthetic interactions with the microtubule cytoskeleton: implications for side effects of general anesthesia.

Craddock TJ, St George M, Freedman H, Barakat KH, Damaraju S, Hameroff S, Tuszynski JA. Craddock TJ, et al. Among authors: barakat kh. PLoS One. 2012;7(6):e37251. doi: 10.1371/journal.pone.0037251. Epub 2012 Jun 25. PLoS One. 2012. PMID: 22761654 Free PMC article.

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