Kim S - Search Results

1

Integrated analysis of DNA methylation and gene expression reveals specific signaling pathways associated with platinum resistance in ovarian cancer.

Li M, Balch C, Montgomery JS, Jeong M, Chung JH, Yan P, Huang TH, Kim S, Nephew KP. Li M, et al. Among authors: kim s. BMC Med Genomics. 2009 Jun 8;2:34. doi: 10.1186/1755-8794-2-34. BMC Med Genomics. 2009. PMID: 19505326 Free PMC article.

2

Enriched transcription factor binding sites in hypermethylated gene promoters in drug resistant cancer cells.

Li M, Paik HI, Balch C, Kim Y, Li L, Huang TH, Nephew KP, Kim S. Li M, et al. Among authors: kim s, kim y. Bioinformatics. 2008 Aug 15;24(16):1745-8. doi: 10.1093/bioinformatics/btn256. Epub 2008 Jun 6. Bioinformatics. 2008. PMID: 18540022 Free PMC article.

3

Computational analysis of microRNA profiles and their target genes suggests significant involvement in breast cancer antiestrogen resistance.

Xin F, Li M, Balch C, Thomson M, Fan M, Liu Y, Hammond SM, Kim S, Nephew KP. Xin F, et al. Among authors: kim s. Bioinformatics. 2009 Feb 15;25(4):430-4. doi: 10.1093/bioinformatics/btn646. Epub 2008 Dec 17. Bioinformatics. 2009. PMID: 19091772 Free PMC article.

4

MicroRNA and mRNA integrated analysis (MMIA): a web tool for examining biological functions of microRNA expression.

Nam S, Li M, Choi K, Balch C, Kim S, Nephew KP. Nam S, et al. Among authors: kim s. Nucleic Acids Res. 2009 Jul;37(Web Server issue):W356-62. doi: 10.1093/nar/gkp294. Epub 2009 May 6. Nucleic Acids Res. 2009. PMID: 19420067 Free PMC article.

5

An integrative analysis of cellular contexts, miRNAs and mRNAs reveals network clusters associated with antiestrogen-resistant breast cancer cells.

Nam S, Long X, Kwon C, Kim S, Nephew KP. Nam S, et al. Among authors: kim s. BMC Genomics. 2012 Dec 27;13:732. doi: 10.1186/1471-2164-13-732. BMC Genomics. 2012. PMID: 23270413 Free PMC article.

6

Integrated analysis of genome-wide DNA methylation and gene expression profiles in molecular subtypes of breast cancer.

Rhee JK, Kim K, Chae H, Evans J, Yan P, Zhang BT, Gray J, Spellman P, Huang TH, Nephew KP, Kim S. Rhee JK, et al. Among authors: kim s, kim k. Nucleic Acids Res. 2013 Oct;41(18):8464-74. doi: 10.1093/nar/gkt643. Epub 2013 Jul 24. Nucleic Acids Res. 2013. PMID: 23887935 Free PMC article.

7

Subtype-specific CpG island shore methylation and mutation patterns in 30 breast cancer cell lines.

Chae H, Lee S, Nephew KP, Kim S. Chae H, et al. Among authors: kim s. BMC Syst Biol. 2016 Dec 23;10(Suppl 4):116. doi: 10.1186/s12918-016-0356-2. BMC Syst Biol. 2016. PMID: 28155687 Free PMC article.

8

New anti-cancer strategies: epigenetic therapies and biomarkers.

Balch C, Montgomery JS, Paik HI, Kim S, Kim S, Huang TH, Nephew KP. Balch C, et al. Among authors: kim s. Front Biosci. 2005 May 1;10:1897-931. doi: 10.2741/1668. Front Biosci. 2005. PMID: 15769674 Review.

9

Comparative analysis using K-mer and K-flank patterns provides evidence for CpG island sequence evolution in mammalian genomes.

Chae H, Park J, Lee SW, Nephew KP, Kim S. Chae H, et al. Among authors: kim s. Nucleic Acids Res. 2013 May;41(9):4783-91. doi: 10.1093/nar/gkt144. Epub 2013 Mar 21. Nucleic Acids Res. 2013. PMID: 23519616 Free PMC article.

10

BioVLAB-MMIA-NGS: microRNA-mRNA integrated analysis using high-throughput sequencing data.

Chae H, Rhee S, Nephew KP, Kim S. Chae H, et al. Among authors: kim s. Bioinformatics. 2015 Jan 15;31(2):265-7. doi: 10.1093/bioinformatics/btu614. Epub 2014 Sep 29. Bioinformatics. 2015. PMID: 25270639 Free article.

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