Olinares PD - Search Results

1

Subunits of the plastid ClpPR protease complex have differential contributions to embryogenesis, plastid biogenesis, and plant development in Arabidopsis.

Kim J, Rudella A, Ramirez Rodriguez V, Zybailov B, Olinares PD, van Wijk KJ. Kim J, et al. Among authors: olinares pd. Plant Cell. 2009 Jun;21(6):1669-92. doi: 10.1105/tpc.108.063784. Epub 2009 Jun 12. Plant Cell. 2009. PMID: 19525416 Free PMC article.

2

PPDB, the Plant Proteomics Database at Cornell.

Sun Q, Zybailov B, Majeran W, Friso G, Olinares PD, van Wijk KJ. Sun Q, et al. Among authors: olinares pd. Nucleic Acids Res. 2009 Jan;37(Database issue):D969-74. doi: 10.1093/nar/gkn654. Epub 2008 Oct 2. Nucleic Acids Res. 2009. PMID: 18832363 Free PMC article.

3

Megadalton complexes in the chloroplast stroma of Arabidopsis thaliana characterized by size exclusion chromatography, mass spectrometry, and hierarchical clustering.

Olinares PD, Ponnala L, van Wijk KJ. Olinares PD, et al. Mol Cell Proteomics. 2010 Jul;9(7):1594-615. doi: 10.1074/mcp.M000038-MCP201. Epub 2010 Apr 26. Mol Cell Proteomics. 2010. PMID: 20423899 Free PMC article.

4

The Clp protease system; a central component of the chloroplast protease network.

Olinares PD, Kim J, van Wijk KJ. Olinares PD, et al. Biochim Biophys Acta. 2011 Aug;1807(8):999-1011. doi: 10.1016/j.bbabio.2010.12.003. Epub 2010 Dec 15. Biochim Biophys Acta. 2011. PMID: 21167127 Free article. Review.

5

Subunit stoichiometry, evolution, and functional implications of an asymmetric plant plastid ClpP/R protease complex in Arabidopsis.

Olinares PD, Kim J, Davis JI, van Wijk KJ. Olinares PD, et al. Plant Cell. 2011 Jun;23(6):2348-61. doi: 10.1105/tpc.111.086454. Epub 2011 Jun 28. Plant Cell. 2011. PMID: 21712416 Free PMC article.

6

The workflow for quantitative proteome analysis of chloroplast development and differentiation, chloroplast mutants, and protein interactions by spectral counting.

Friso G, Olinares PD, van Wijk KJ. Friso G, et al. Among authors: olinares pd. Methods Mol Biol. 2011;775:265-82. doi: 10.1007/978-1-61779-237-3_14. Methods Mol Biol. 2011. PMID: 21863448

7

Construction of plastid reference proteomes for maize and Arabidopsis and evaluation of their orthologous relationships; the concept of orthoproteomics.

Huang M, Friso G, Nishimura K, Qu X, Olinares PD, Majeran W, Sun Q, van Wijk KJ. Huang M, et al. Among authors: olinares pd. J Proteome Res. 2013 Jan 4;12(1):491-504. doi: 10.1021/pr300952g. Epub 2012 Dec 12. J Proteome Res. 2013. PMID: 23198870

8

A bayesian mixture model for comparative spectral count data in shotgun proteomics.

Booth JG, Eilertson KE, Olinares PD, Yu H. Booth JG, et al. Among authors: olinares pd. Mol Cell Proteomics. 2011 Aug;10(8):M110.007203. doi: 10.1074/mcp.M110.007203. Epub 2011 May 20. Mol Cell Proteomics. 2011. PMID: 21602509 Free PMC article.

9

A Robust Workflow for Native Mass Spectrometric Analysis of Affinity-Isolated Endogenous Protein Assemblies.

Olinares PD, Dunn AD, Padovan JC, Fernandez-Martinez J, Rout MP, Chait BT. Olinares PD, et al. Anal Chem. 2016 Mar 1;88(5):2799-807. doi: 10.1021/acs.analchem.5b04477. Epub 2016 Feb 18. Anal Chem. 2016. PMID: 26849307 Free PMC article.

10

Native Mass Spectrometry Analysis of Affinity-Captured Endogenous Yeast RNA Exosome Complexes.

Olinares PDB, Chait BT. Olinares PDB, et al. Methods Mol Biol. 2020;2062:357-382. doi: 10.1007/978-1-4939-9822-7_17. Methods Mol Biol. 2020. PMID: 31768985

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