Bakal C - Search Results

1

RNAiCut: automated detection of significant genes from functional genomic screens.

Kaplow IM, Singh R, Friedman A, Bakal C, Perrimon N, Berger B. Kaplow IM, et al. Among authors: bakal c. Nat Methods. 2009 Jul;6(7):476-7. doi: 10.1038/nmeth0709-476. Nat Methods. 2009. PMID: 19564846 No abstract available.

2

Genomic screening with RNAi: results and challenges.

Mohr S, Bakal C, Perrimon N. Mohr S, et al. Among authors: bakal c. Annu Rev Biochem. 2010;79:37-64. doi: 10.1146/annurev-biochem-060408-092949. Annu Rev Biochem. 2010. PMID: 20367032 Free PMC article. Review.

3

The twin spot generator for differential Drosophila lineage analysis.

Griffin R, Sustar A, Bonvin M, Binari R, del Valle Rodriguez A, Hohl AM, Bateman JR, Villalta C, Heffern E, Grunwald D, Bakal C, Desplan C, Schubiger G, Wu CT, Perrimon N. Griffin R, et al. Among authors: bakal c. Nat Methods. 2009 Aug;6(8):600-2. doi: 10.1038/nmeth.1349. Epub 2009 Jul 26. Nat Methods. 2009. PMID: 19633664 Free PMC article.

4

Inference of RhoGAP/GTPase regulation using single-cell morphological data from a combinatorial RNAi screen.

Nir O, Bakal C, Perrimon N, Berger B. Nir O, et al. Among authors: bakal c. Genome Res. 2010 Mar;20(3):372-80. doi: 10.1101/gr.100248.109. Epub 2010 Feb 9. Genome Res. 2010. PMID: 20144944 Free PMC article.

5

A screen for morphological complexity identifies regulators of switch-like transitions between discrete cell shapes.

Yin Z, Sadok A, Sailem H, McCarthy A, Xia X, Li F, Garcia MA, Evans L, Barr AR, Perrimon N, Marshall CJ, Wong ST, Bakal C. Yin Z, et al. Among authors: bakal c. Nat Cell Biol. 2013 Jul;15(7):860-71. doi: 10.1038/ncb2764. Epub 2013 Jun 9. Nat Cell Biol. 2013. PMID: 23748611 Free PMC article.

6

Phosphorylation networks regulating JNK activity in diverse genetic backgrounds.

Bakal C, Linding R, Llense F, Heffern E, Martin-Blanco E, Pawson T, Perrimon N. Bakal C, et al. Science. 2008 Oct 17;322(5900):453-6. doi: 10.1126/science.1158739. Science. 2008. PMID: 18927396 Free PMC article.

7

Realizing the promise of RNAi high throughput screening.

Bakal C, Perrimon N. Bakal C, et al. Dev Cell. 2010 Apr 20;18(4):506-7. doi: 10.1016/j.devcel.2010.04.005. Dev Cell. 2010. PMID: 20412765 Free PMC article.

8

Quantitative morphological signatures define local signaling networks regulating cell morphology.

Bakal C, Aach J, Church G, Perrimon N. Bakal C, et al. Science. 2007 Jun 22;316(5832):1753-6. doi: 10.1126/science.1140324. Science. 2007. PMID: 17588932

9

Using iterative cluster merging with improved gap statistics to perform online phenotype discovery in the context of high-throughput RNAi screens.

Yin Z, Zhou X, Bakal C, Li F, Sun Y, Perrimon N, Wong ST. Yin Z, et al. Among authors: bakal c. BMC Bioinformatics. 2008 Jun 5;9:264. doi: 10.1186/1471-2105-9-264. BMC Bioinformatics. 2008. PMID: 18534020 Free PMC article.

10

A sensitised RNAi screen reveals a ch-TOG genetic interaction network required for spindle assembly.

Barr AR, Bakal C. Barr AR, et al. Among authors: bakal c. Sci Rep. 2015 Jun 3;5:10564. doi: 10.1038/srep10564. Sci Rep. 2015. PMID: 26037491 Free PMC article.

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