Raj A - Search Results

1

Many human large intergenic noncoding RNAs associate with chromatin-modifying complexes and affect gene expression.

Khalil AM, Guttman M, Huarte M, Garber M, Raj A, Rivea Morales D, Thomas K, Presser A, Bernstein BE, van Oudenaarden A, Regev A, Lander ES, Rinn JL. Khalil AM, et al. Among authors: raj a. Proc Natl Acad Sci U S A. 2009 Jul 14;106(28):11667-72. doi: 10.1073/pnas.0904715106. Epub 2009 Jul 1. Proc Natl Acad Sci U S A. 2009. PMID: 19571010 Free PMC article.

2

Imaging individual mRNA molecules using multiple singly labeled probes.

Raj A, van den Bogaard P, Rifkin SA, van Oudenaarden A, Tyagi S. Raj A, et al. Nat Methods. 2008 Oct;5(10):877-9. doi: 10.1038/nmeth.1253. Epub 2008 Sep 21. Nat Methods. 2008. PMID: 18806792 Free PMC article.

3

Nature, nurture, or chance: stochastic gene expression and its consequences.

Raj A, van Oudenaarden A. Raj A, et al. Cell. 2008 Oct 17;135(2):216-26. doi: 10.1016/j.cell.2008.09.050. Cell. 2008. PMID: 18957198 Free PMC article. Review.

4

Single-molecule approaches to stochastic gene expression.

Raj A, van Oudenaarden A. Raj A, et al. Annu Rev Biophys. 2009;38:255-70. doi: 10.1146/annurev.biophys.37.032807.125928. Annu Rev Biophys. 2009. PMID: 19416069 Free PMC article. Review.

5

Variability in gene expression underlies incomplete penetrance.

Raj A, Rifkin SA, Andersen E, van Oudenaarden A. Raj A, et al. Nature. 2010 Feb 18;463(7283):913-8. doi: 10.1038/nature08781. Nature. 2010. PMID: 20164922 Free PMC article.

6

Imaging single mRNA molecules in yeast.

Youk H, Raj A, van Oudenaarden A. Youk H, et al. Among authors: raj a. Methods Enzymol. 2010;470:429-46. doi: 10.1016/S0076-6879(10)70017-3. Epub 2010 Mar 1. Methods Enzymol. 2010. PMID: 20946820

7

Genes methylated by DNA methyltransferase 3b are similar in mouse intestine and human colon cancer.

Steine EJ, Ehrich M, Bell GW, Raj A, Reddy S, van Oudenaarden A, Jaenisch R, Linhart HG. Steine EJ, et al. Among authors: raj a. J Clin Invest. 2011 May;121(5):1748-52. doi: 10.1172/JCI43169. Epub 2011 Apr 1. J Clin Invest. 2011. PMID: 21490393 Free PMC article.

8

linc-HOXA1 is a noncoding RNA that represses Hoxa1 transcription in cis.

Maamar H, Cabili MN, Rinn J, Raj A. Maamar H, et al. Among authors: raj a. Genes Dev. 2013 Jun 1;27(11):1260-71. doi: 10.1101/gad.217018.113. Epub 2013 May 30. Genes Dev. 2013. PMID: 23723417 Free PMC article.

9

Topological organization of multichromosomal regions by the long intergenic noncoding RNA Firre.

Hacisuleyman E, Goff LA, Trapnell C, Williams A, Henao-Mejia J, Sun L, McClanahan P, Hendrickson DG, Sauvageau M, Kelley DR, Morse M, Engreitz J, Lander ES, Guttman M, Lodish HF, Flavell R, Raj A, Rinn JL. Hacisuleyman E, et al. Among authors: raj a. Nat Struct Mol Biol. 2014 Feb;21(2):198-206. doi: 10.1038/nsmb.2764. Epub 2014 Jan 26. Nat Struct Mol Biol. 2014. PMID: 24463464 Free PMC article.

10

LincRNA-p21 activates p21 in cis to promote Polycomb target gene expression and to enforce the G1/S checkpoint.

Dimitrova N, Zamudio JR, Jong RM, Soukup D, Resnick R, Sarma K, Ward AJ, Raj A, Lee JT, Sharp PA, Jacks T. Dimitrova N, et al. Among authors: raj a. Mol Cell. 2014 Jun 5;54(5):777-90. doi: 10.1016/j.molcel.2014.04.025. Epub 2014 May 22. Mol Cell. 2014. PMID: 24857549 Free PMC article.

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