Gerstein M - Search Results

1

RigidFinder: a fast and sensitive method to detect rigid blocks in large macromolecular complexes.

Abyzov A, Bjornson R, Felipe M, Gerstein M. Abyzov A, et al. Among authors: gerstein m. Proteins. 2010 Feb 1;78(2):309-24. doi: 10.1002/prot.22544. Proteins. 2010. PMID: 19705487

2

A database of macromolecular motions.

Gerstein M, Krebs W. Gerstein M, et al. Nucleic Acids Res. 1998 Sep 15;26(18):4280-90. doi: 10.1093/nar/26.18.4280. Nucleic Acids Res. 1998. PMID: 9722650 Free PMC article.

3

Patterns of protein-fold usage in eight microbial genomes: a comprehensive structural census.

Gerstein M. Gerstein M. Proteins. 1998 Dec 1;33(4):518-34. doi: 10.1002/(sici)1097-0134(19981201)33:4<518::aid-prot5>3.0.co;2-j. Proteins. 1998. PMID: 9849936

4

Structural genomics analysis: characteristics of atypical, common, and horizontally transferred folds.

Hegyi H, Lin J, Greenbaum D, Gerstein M. Hegyi H, et al. Among authors: gerstein m. Proteins. 2002 May 1;47(2):126-41. doi: 10.1002/prot.10078. Proteins. 2002. PMID: 11933060

5

Normal mode analysis of macromolecular motions in a database framework: developing mode concentration as a useful classifying statistic.

Krebs WG, Alexandrov V, Wilson CA, Echols N, Yu H, Gerstein M. Krebs WG, et al. Among authors: gerstein m. Proteins. 2002 Sep 1;48(4):682-95. doi: 10.1002/prot.10168. Proteins. 2002. PMID: 12211036

6

MolMovDB: analysis and visualization of conformational change and structural flexibility.

Echols N, Milburn D, Gerstein M. Echols N, et al. Among authors: gerstein m. Nucleic Acids Res. 2003 Jan 1;31(1):478-82. doi: 10.1093/nar/gkg104. Nucleic Acids Res. 2003. PMID: 12520056 Free PMC article.

7

A method using active-site sequence conservation to find functional shifts in protein families: application to the enzymes of central metabolism, leading to the identification of an anomalous isocitrate dehydrogenase in pathogens.

Das R, Gerstein M. Das R, et al. Among authors: gerstein m. Proteins. 2004 May 1;55(2):455-63. doi: 10.1002/prot.10639. Proteins. 2004. PMID: 15048835

8

The Database of Macromolecular Motions: new features added at the decade mark.

Flores S, Echols N, Milburn D, Hespenheide B, Keating K, Lu J, Wells S, Yu EZ, Thorpe M, Gerstein M. Flores S, et al. Among authors: gerstein m. Nucleic Acids Res. 2006 Jan 1;34(Database issue):D296-301. doi: 10.1093/nar/gkj046. Nucleic Acids Res. 2006. PMID: 16381870 Free PMC article.

9

HingeMaster: normal mode hinge prediction approach and integration of complementary predictors.

Flores SC, Keating KS, Painter J, Morcos F, Nguyen K, Merritt EA, Kuhn LA, Gerstein MB. Flores SC, et al. Proteins. 2008 Nov 1;73(2):299-319. doi: 10.1002/prot.22060. Proteins. 2008. PMID: 18433058

10

MSB: a mean-shift-based approach for the analysis of structural variation in the genome.

Wang LY, Abyzov A, Korbel JO, Snyder M, Gerstein M. Wang LY, et al. Among authors: gerstein m. Genome Res. 2009 Jan;19(1):106-17. doi: 10.1101/gr.080069.108. Epub 2008 Nov 26. Genome Res. 2009. PMID: 19037015 Free PMC article.

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