Pereira CA - Search Results

1

A reliable measure of similarity based on dependency for short time series: an application to gene expression networks.

Campiteli MG, Soriani FM, Malavazi I, Kinouchi O, Pereira CA, Goldman GH. Campiteli MG, et al. Among authors: pereira ca. BMC Bioinformatics. 2009 Aug 28;10:270. doi: 10.1186/1471-2105-10-270. BMC Bioinformatics. 2009. PMID: 19712487 Free PMC article.

2

Bayesian model accounting for within-class biological variability in Serial Analysis of Gene Expression (SAGE).

Vêncio RZ, Brentani H, Patrão DF, Pereira CA. Vêncio RZ, et al. Among authors: pereira ca. BMC Bioinformatics. 2004 Aug 31;5:119. doi: 10.1186/1471-2105-5-119. BMC Bioinformatics. 2004. PMID: 15339345 Free PMC article.

3

NERI: network-medicine based integrative approach for disease gene prioritization by relative importance.

Simões SN, Martins DC Jr, Pereira CA, Hashimoto RF, Brentani H. Simões SN, et al. Among authors: pereira ca. BMC Bioinformatics. 2015;16 Suppl 19(Suppl 19):S9. doi: 10.1186/1471-2105-16-S19-S9. Epub 2015 Dec 16. BMC Bioinformatics. 2015. PMID: 26696568 Free PMC article.

4

The full Bayesian significance test for mixture models: results in gene expression clustering.

Lauretto MS, Pereira CA, Stern JM. Lauretto MS, et al. Among authors: pereira ca. Genet Mol Res. 2008 Sep 23;7(3):883-97. doi: 10.4238/vol7-3x-meeting06. Genet Mol Res. 2008. PMID: 18949707 Free article.

5

Using credibility intervals instead of hypothesis tests in SAGE analysis.

Vêncio RZ, Brentani H, Pereira CA. Vêncio RZ, et al. Among authors: pereira ca. Bioinformatics. 2003 Dec 12;19(18):2461-4. doi: 10.1093/bioinformatics/btg357. Bioinformatics. 2003. PMID: 14668232

6

BayBoots: a model-free Bayesian tool to identify class markers from gene expression data.

Vêncio RZ, Patrão DF, Baptista CS, Pereira CA, Zingales B. Vêncio RZ, et al. Among authors: pereira ca. Genet Mol Res. 2006 Mar 31;5(1):138-42. Genet Mol Res. 2006. PMID: 16755505 Free article.

7

A Set of miRNAs, Their Gene and Protein Targets and Stromal Genes Distinguish Early from Late Onset ER Positive Breast Cancer.

Bastos EP, Brentani H, Pereira CA, Polpo A, Lima L, Puga RD, Pasini FS, Osorio CA, Roela RA, Achatz MI, Trapé AP, Gonzalez-Angulo AM, Brentani MM. Bastos EP, et al. Among authors: pereira ca. PLoS One. 2016 May 6;11(5):e0154325. doi: 10.1371/journal.pone.0154325. eCollection 2016. PLoS One. 2016. PMID: 27152840 Free PMC article.

8

A straightforward multiallelic significance test for the Hardy-Weinberg equilibrium law.

Lauretto MS, Nakano F, Faria SR Jr, Pereira CA, Stern JM. Lauretto MS, et al. Among authors: pereira ca. Genet Mol Biol. 2009 Jul;32(3):619-25. doi: 10.1590/S1415-47572009000300028. Epub 2009 Sep 1. Genet Mol Biol. 2009. PMID: 21637528 Free PMC article.

9

Genuine Bayesian multiallelic significance test for the Hardy-Weinberg equilibrium law.

Pereira CA, Nakano F, Stern JM, Whittle MR. Pereira CA, et al. Genet Mol Res. 2006 Oct 31;5(4):619-31. Genet Mol Res. 2006. PMID: 17183473 Free article.

10

Synchronous down-modulation of miR-17 family members is an early causative event in the retinal angiogenic switch.

Nunes DN, Dias-Neto E, Cardó-Vila M, Edwards JK, Dobroff AS, Giordano RJ, Mandelin J, Brentani HP, Hasselgren C, Yao VJ, Marchiò S, Pereira CA, Passetti F, Calin GA, Sidman RL, Arap W, Pasqualini R. Nunes DN, et al. Among authors: pereira ca. Proc Natl Acad Sci U S A. 2015 Mar 24;112(12):3770-5. doi: 10.1073/pnas.1500008112. Epub 2015 Mar 9. Proc Natl Acad Sci U S A. 2015. PMID: 25775553 Free PMC article.

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