Joo K - Search Results

1

Protein-binding site prediction based on three-dimensional protein modeling.

Oh M, Joo K, Lee J. Oh M, et al. Among authors: joo k. Proteins. 2009;77 Suppl 9:152-6. doi: 10.1002/prot.22572. Proteins. 2009. PMID: 19768678

2

Prediction of protein tertiary structure using PROFESY, a novel method based on fragment assembly and conformational space annealing.

Lee J, Kim SY, Joo K, Kim I, Lee J. Lee J, et al. Among authors: joo k. Proteins. 2004 Sep 1;56(4):704-14. doi: 10.1002/prot.20150. Proteins. 2004. PMID: 15281124

3

Assessment of predictions submitted for the CASP7 domain prediction category.

Tress M, Cheng J, Baldi P, Joo K, Lee J, Seo JH, Lee J, Baker D, Chivian D, Kim D, Ezkurdia I. Tress M, et al. Among authors: joo k. Proteins. 2007;69 Suppl 8:137-51. doi: 10.1002/prot.21675. Proteins. 2007. PMID: 17680686

4

High accuracy template based modeling by global optimization.

Joo K, Lee J, Lee S, Seo JH, Lee SJ, Lee J. Joo K, et al. Proteins. 2007;69 Suppl 8:83-9. doi: 10.1002/prot.21628. Proteins. 2007. PMID: 17894332

5

Re-examination of structure optimization of off-lattice protein AB models by conformational space annealing.

Lee J, Joo K, Kim SY, Lee J. Lee J, et al. Among authors: joo k. J Comput Chem. 2008 Nov 15;29(14):2479-84. doi: 10.1002/jcc.20995. J Comput Chem. 2008. PMID: 18470971

6

Multiple sequence alignment by conformational space annealing.

Joo K, Lee J, Kim I, Lee SJ, Lee J. Joo K, et al. Biophys J. 2008 Nov 15;95(10):4813-9. doi: 10.1529/biophysj.108.129684. Epub 2008 Aug 8. Biophys J. 2008. PMID: 18689453 Free PMC article.

7

All-atom chain-building by optimizing MODELLER energy function using conformational space annealing.

Joo K, Lee J, Seo JH, Lee K, Kim BG, Lee J. Joo K, et al. Proteins. 2009 Jun;75(4):1010-23. doi: 10.1002/prot.22312. Proteins. 2009. PMID: 19089941

8

Structural studies of a bacterial condensin complex reveal ATP-dependent disruption of intersubunit interactions.

Woo JS, Lim JH, Shin HC, Suh MK, Ku B, Lee KH, Joo K, Robinson H, Lee J, Park SY, Ha NC, Oh BH. Woo JS, et al. Among authors: joo k. Cell. 2009 Jan 9;136(1):85-96. doi: 10.1016/j.cell.2008.10.050. Cell. 2009. PMID: 19135891 Free article.

9

Improving physical realism, stereochemistry, and side-chain accuracy in homology modeling: Four approaches that performed well in CASP8.

Krieger E, Joo K, Lee J, Lee J, Raman S, Thompson J, Tyka M, Baker D, Karplus K. Krieger E, et al. Among authors: joo k. Proteins. 2009;77 Suppl 9(Suppl 9):114-22. doi: 10.1002/prot.22570. Proteins. 2009. PMID: 19768677 Free PMC article.

10

Necessary and sufficient conditions for the asymmetric synthesis of chiral amines using ω-aminotransferases.

Seo JH, Kyung D, Joo K, Lee J, Kim BG. Seo JH, et al. Among authors: joo k. Biotechnol Bioeng. 2011 Feb;108(2):253-63. doi: 10.1002/bit.22930. Biotechnol Bioeng. 2011. PMID: 20824676

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