Sun J - Search Results

1

Constructing multi-resolution Markov State Models (MSMs) to elucidate RNA hairpin folding mechanisms.

Huang X, Yao Y, Bowman GR, Sun J, Guibas LJ, Carlsson G, Pande VS. Huang X, et al. Among authors: sun j. Pac Symp Biocomput. 2010:228-39. doi: 10.1142/9789814295291_0025. Pac Symp Biocomput. 2010. PMID: 19908375 Free PMC article.

2

Structural insight into RNA hairpin folding intermediates.

Bowman GR, Huang X, Yao Y, Sun J, Carlsson G, Guibas LJ, Pande VS. Bowman GR, et al. Among authors: sun j. J Am Chem Soc. 2008 Jul 30;130(30):9676-8. doi: 10.1021/ja8032857. Epub 2008 Jul 1. J Am Chem Soc. 2008. PMID: 18593120 Free PMC article.

3

Topological methods for exploring low-density states in biomolecular folding pathways.

Yao Y, Sun J, Huang X, Bowman GR, Singh G, Lesnick M, Guibas LJ, Pande VS, Carlsson G. Yao Y, et al. Among authors: sun j. J Chem Phys. 2009 Apr 14;130(14):144115. doi: 10.1063/1.3103496. J Chem Phys. 2009. PMID: 19368437 Free PMC article.

4

A fast parallel clustering algorithm for molecular simulation trajectories.

Zhao Y, Sheong FK, Sun J, Sander P, Huang X. Zhao Y, et al. Among authors: sun j. J Comput Chem. 2013 Jan 15;34(2):95-104. doi: 10.1002/jcc.23110. Epub 2012 Sep 20. J Comput Chem. 2013. PMID: 22996151

5

Hierarchical Nyström methods for constructing Markov state models for conformational dynamics.

Yao Y, Cui RZ, Bowman GR, Silva DA, Sun J, Huang X. Yao Y, et al. Among authors: sun j. J Chem Phys. 2013 May 7;138(17):174106. doi: 10.1063/1.4802007. J Chem Phys. 2013. PMID: 23656113

6

Efficient and Rapid Generation of Neural Stem Cells by Direct Conversion Fibroblasts with Single microRNAs.

Li Y, Sun J, Xu T, Dai B, Wang Y. Li Y, et al. Among authors: sun j. Stem Cells. 2025 Jan 25:sxaf003. doi: 10.1093/stmcls/sxaf003. Online ahead of print. Stem Cells. 2025. PMID: 39862169

7

Negative association between 15 obesity- and lipid-related indices and testosterone in adult males: a population based cross-sectional study.

Guo W, Zhao S, Chang Q, Sun J, Fan Y, Liu J. Guo W, et al. Among authors: sun j. Lipids Health Dis. 2025 Jan 25;24(1):24. doi: 10.1186/s12944-025-02436-6. Lipids Health Dis. 2025. PMID: 39863911

8

HDN-DDI: a novel framework for predicting drug-drug interactions using hierarchical molecular graphs and enhanced dual-view representation learning.

Sun J, Zheng H. Sun J, et al. BMC Bioinformatics. 2025 Jan 25;26(1):28. doi: 10.1186/s12859-025-06052-0. BMC Bioinformatics. 2025. PMID: 39863877

9

MAPK4 inhibits the early aberrant activation of B cells in rheumatoid arthritis by promoting the IRF4-SHIP1 signaling pathway.

Huang P, Yang G, Zhang P, Zhu Y, Guan Y, Sun J, Li Q, An Y, Shi X, Zhao J, Liu C, He Z, Chen Y, Du Z. Huang P, et al. Among authors: sun j. Cell Death Dis. 2025 Jan 26;16(1):43. doi: 10.1038/s41419-025-07352-2. Cell Death Dis. 2025. PMID: 39863600

10

Sagittaria sagittifolia polysaccharide extract regulates Nrf2 to improve endoplasmic reticulum stress-mediated apoptosis in rat cataracts and HLEB3 cells.

Zhou MY, Liu BQ, Gao X, Zhang SJ, Jiang Y, Yang T, Sun JB, Zhang X, Liao Y. Zhou MY, et al. Among authors: sun jb. Int J Biol Macromol. 2025 Jan 23:140270. doi: 10.1016/j.ijbiomac.2025.140270. Online ahead of print. Int J Biol Macromol. 2025. PMID: 39863224

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