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An analysis pipeline for the inference of protein-protein interaction networks.
Taylor RC, Singhal M, Daly DS, Gilmore J, Cannon WR, Domico K, White AM, Auberry DL, Auberry KJ, Hooker BS, Hurst G, McDermott JE, McDonald WH, Pelletier DA, Schmoyer D, Wiley HS. Taylor RC, et al. Among authors: daly ds. Int J Data Min Bioinform. 2009;3(4):409-30. doi: 10.1504/ijdmb.2009.029204. Int J Data Min Bioinform. 2009. PMID: 20052905
A Bayesian estimator of protein-protein association probabilities.
Gilmore JM, Auberry DL, Sharp JL, White AM, Anderson KK, Daly DS. Gilmore JM, et al. Among authors: daly ds. Bioinformatics. 2008 Jul 1;24(13):1554-5. doi: 10.1093/bioinformatics/btn238. Epub 2008 May 22. Bioinformatics. 2008. PMID: 18499697
ProMAT: protein microarray analysis tool.
White AM, Daly DS, Varnum SM, Anderson KK, Bollinger N, Zangar RC. White AM, et al. Among authors: daly ds. Bioinformatics. 2006 May 15;22(10):1278-9. doi: 10.1093/bioinformatics/btl093. Epub 2006 Apr 4. Bioinformatics. 2006. PMID: 16595561
Analysis of high-throughput ELISA microarray data.
White AM, Daly DS, Zangar RC. White AM, et al. Among authors: daly ds. Methods Mol Biol. 2011;694:191-211. doi: 10.1007/978-1-60761-977-2_13. Methods Mol Biol. 2011. PMID: 21082436
Automated Microarray Image Analysis Toolbox for MATLAB.
White AM, Daly DS, Willse AR, Protic M, Chandler DP. White AM, et al. Among authors: daly ds. Bioinformatics. 2005 Sep 1;21(17):3578-9. doi: 10.1093/bioinformatics/bti576. Epub 2005 Jul 26. Bioinformatics. 2005. PMID: 16046497
A general system for studying protein-protein interactions in Gram-negative bacteria.
Pelletier DA, Hurst GB, Foote LJ, Lankford PK, McKeown CK, Lu TY, Schmoyer DD, Shah MB, Hervey WJ 4th, McDonald WH, Hooker BS, Cannon WR, Daly DS, Gilmore JM, Wiley HS, Auberry DL, Wang Y, Larimer FW, Kennel SJ, Doktycz MJ, Morrell-Falvey JL, Owens ET, Buchanan MV. Pelletier DA, et al. Among authors: daly ds. J Proteome Res. 2008 Aug;7(8):3319-28. doi: 10.1021/pr8001832. Epub 2008 Jul 1. J Proteome Res. 2008. PMID: 18590317
43 results