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High Genetic Diversity of Carbapenem-Resistant Acinetobacter baumannii Isolates Recovered in Nigerian Hospitals in 2016 to 2020.
Odih EE, Oaikhena AO, Underwood A, Hounmanou YMG, Oduyebo OO, Fadeyi A, Aboderin AO, Ogunleye VO, Argimón S, Akpunonu VN, Oshun PO, Egwuenu A, Okwor TJ, Ihekweazu C, Aanensen DM, Dalsgaard A, Okeke IN. Odih EE, et al. Among authors: aanensen dm. mSphere. 2023 Jun 22;8(3):e0009823. doi: 10.1128/msphere.00098-23. Epub 2023 Apr 17. mSphere. 2023. PMID: 37067411 Free PMC article.
Comparing genomic variant identification protocols for Candida auris.
Li X, Muñoz JF, Gade L, Argimon S, Bougnoux ME, Bowers JR, Chow NA, Cuesta I, Farrer RA, Maufrais C, Monroy-Nieto J, Pradhan D, Uehling J, Vu D, Yeats CA, Aanensen DM, d'Enfert C, Engelthaler DM, Eyre DW, Fisher MC, Hagen F, Meyer W, Singh G, Alastruey-Izquierdo A, Litvintseva AP, Cuomo CA. Li X, et al. Among authors: aanensen dm. Microb Genom. 2023 Apr;9(4):mgen000979. doi: 10.1099/mgen.0.000979. Microb Genom. 2023. PMID: 37043380 Free PMC article.
Genomics-informed outbreak investigations of SARS-CoV-2 using civet.
O'Toole Á, Hill V, Jackson B, Dewar R, Sahadeo N, Colquhoun R, Rooke S, McCrone JT, Duggan K, McHugh MP, Nicholls SM, Poplawski R; COVID-19 Genomics UK (COG-UK) Consortium; COVID-19 Impact Project (Trinidad & Tobago Group); Aanensen D, Holden M, Connor T, Loman N, Goodfellow I, Carrington CVF, Templeton K, Rambaut A. O'Toole Á, et al. PLOS Glob Public Health. 2022 Dec 9;2(12):e0000704. doi: 10.1371/journal.pgph.0000704. eCollection 2022. PLOS Glob Public Health. 2022. PMID: 36962792 Free PMC article.
Global scenario of the RmtE pan-aminoglycoside-resistance mechanism: emergence of the rmtE4 gene in South America associated with a hospital-related IncL plasmid.
Delgado-Blas JF, Ovejero CM, David S, Serna C, Pulido-Vadillo M, Montero N, Aanensen DM, Abadia-Patiño L, Gonzalez-Zorn B. Delgado-Blas JF, et al. Among authors: aanensen dm. Microb Genom. 2023 Mar;9(3):mgen000946. doi: 10.1099/mgen.0.000946. Microb Genom. 2023. PMID: 36961505 Free PMC article.
An ST131 clade and a phylogroup A clade bearing an O101-like O-antigen cluster predominate among bloodstream Escherichia coli isolates from South-West Nigeria hospitals.
Afolayan AO, Aboderin AO, Oaikhena AO, Odih EE, Ogunleye VO, Adeyemo AT, Adeyemo AT, Bejide OS, Underwood A, Argimón S, Abrudan M, Egwuenu A, Ihekweazu C, Aanensen DM, Okeke IN. Afolayan AO, et al. Among authors: aanensen dm. Microb Genom. 2022 Dec;8(12):mgen000863. doi: 10.1099/mgen.0.000863. Microb Genom. 2022. PMID: 36748556 Free PMC article.
154 results