Núñez-Ramírez R - Search Results

1

Dynamic effects of cofactors and DNA on the oligomeric state of human mitochondrial DNA helicase.

Ziebarth TD, Gonzalez-Soltero R, Makowska-Grzyska MM, Núñez-Ramírez R, Carazo JM, Kaguni LS. Ziebarth TD, et al. J Biol Chem. 2010 May 7;285(19):14639-47. doi: 10.1074/jbc.M109.099663. Epub 2010 Mar 8. J Biol Chem. 2010. PMID: 20212038 Free PMC article.

2

Fast, robust, and accurate determination of transmission electron microscopy contrast transfer function.

Sorzano CO, Jonic S, Núñez-Ramírez R, Boisset N, Carazo JM. Sorzano CO, et al. J Struct Biol. 2007 Nov;160(2):249-62. doi: 10.1016/j.jsb.2007.08.013. Epub 2007 Aug 29. J Struct Biol. 2007. PMID: 17911028

3

The antibacterial cell division inhibitor PC190723 is an FtsZ polymer-stabilizing agent that induces filament assembly and condensation.

Andreu JM, Schaffner-Barbero C, Huecas S, Alonso D, Lopez-Rodriguez ML, Ruiz-Avila LB, Núñez-Ramírez R, Llorca O, Martín-Galiano AJ. Andreu JM, et al. J Biol Chem. 2010 May 7;285(19):14239-46. doi: 10.1074/jbc.M109.094722. Epub 2010 Mar 8. J Biol Chem. 2010. PMID: 20212044 Free PMC article.

4

Quaternary polymorphism of replicative helicase G40P: structural mapping and domain rearrangement.

Núñez-Ramírez R, Robledo Y, Mesa P, Ayora S, Alonso JC, Carazo JM, Donate LE. Núñez-Ramírez R, et al. J Mol Biol. 2006 Apr 7;357(4):1063-76. doi: 10.1016/j.jmb.2006.01.091. Epub 2006 Feb 9. J Mol Biol. 2006. PMID: 16490212

5

3D architecture of DNA Pol alpha reveals the functional core of multi-subunit replicative polymerases.

Klinge S, Núñez-Ramírez R, Llorca O, Pellegrini L. Klinge S, et al. EMBO J. 2009 Jul 8;28(13):1978-87. doi: 10.1038/emboj.2009.150. Epub 2009 Jun 4. EMBO J. 2009. PMID: 19494830 Free PMC article.

6

Image processing for electron microscopy single-particle analysis using XMIPP.

Scheres SH, Núñez-Ramírez R, Sorzano CO, Carazo JM, Marabini R. Scheres SH, et al. Nat Protoc. 2008;3(6):977-90. doi: 10.1038/nprot.2008.62. Nat Protoc. 2008. PMID: 18536645 Free PMC article.

7

Modeling experimental image formation for likelihood-based classification of electron microscopy data.

Scheres SH, Núñez-Ramírez R, Gómez-Llorente Y, San Martín C, Eggermont PP, Carazo JM. Scheres SH, et al. Structure. 2007 Oct;15(10):1167-77. doi: 10.1016/j.str.2007.09.003. Structure. 2007. PMID: 17937907 Free PMC article.

8

Loading a ring: structure of the Bacillus subtilis DnaB protein, a co-loader of the replicative helicase.

Núñez-Ramírez R, Velten M, Rivas G, Polard P, Carazo JM, Donate LE. Núñez-Ramírez R, et al. J Mol Biol. 2007 Mar 30;367(3):764-9. doi: 10.1016/j.jmb.2006.12.075. Epub 2007 Jan 9. J Mol Biol. 2007. PMID: 17289076

9

Conformational rearrangements of SV40 large T antigen during early replication events.

Cuesta I, Núñez-Ramírez R, Scheres SH, Gai D, Chen XS, Fanning E, Carazo JM. Cuesta I, et al. J Mol Biol. 2010 Apr 16;397(5):1276-86. doi: 10.1016/j.jmb.2010.02.042. Epub 2010 Feb 26. J Mol Biol. 2010. PMID: 20219473 Free PMC article.

10

Iterative elastic 3D-to-2D alignment method using normal modes for studying structural dynamics of large macromolecular complexes.

Jin Q, Sorzano CO, de la Rosa-Trevín JM, Bilbao-Castro JR, Núñez-Ramírez R, Llorca O, Tama F, Jonić S. Jin Q, et al. Structure. 2014 Mar 4;22(3):496-506. doi: 10.1016/j.str.2014.01.004. Epub 2014 Feb 6. Structure. 2014. PMID: 24508340 Free article.

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