Freeman TC - Search Results

1

Construction of a large scale integrated map of macrophage pathogen recognition and effector systems.

Raza S, McDerment N, Lacaze PA, Robertson K, Watterson S, Chen Y, Chisholm M, Eleftheriadis G, Monk S, O'Sullivan M, Turnbull A, Roy D, Theocharidis A, Ghazal P, Freeman TC. Raza S, et al. Among authors: freeman tc. BMC Syst Biol. 2010 May 14;4:63. doi: 10.1186/1752-0509-4-63. BMC Syst Biol. 2010. PMID: 20470404 Free PMC article.

2

A logic-based diagram of signalling pathways central to macrophage activation.

Raza S, Robertson KA, Lacaze PA, Page D, Enright AJ, Ghazal P, Freeman TC. Raza S, et al. Among authors: freeman tc. BMC Syst Biol. 2008 Apr 23;2:36. doi: 10.1186/1752-0509-2-36. BMC Syst Biol. 2008. PMID: 18433497 Free PMC article.

3

The mEPN scheme: an intuitive and flexible graphical system for rendering biological pathways.

Freeman TC, Raza S, Theocharidis A, Ghazal P. Freeman TC, et al. BMC Syst Biol. 2010 May 17;4:65. doi: 10.1186/1752-0509-4-65. BMC Syst Biol. 2010. PMID: 20478018 Free PMC article.

4

Combined genome-wide expression profiling and targeted RNA interference in primary mouse macrophages reveals perturbation of transcriptional networks associated with interferon signalling.

Lacaze P, Raza S, Sing G, Page D, Forster T, Storm P, Craigon M, Awad T, Ghazal P, Freeman TC. Lacaze P, et al. Among authors: freeman tc. BMC Genomics. 2009 Aug 10;10:372. doi: 10.1186/1471-2164-10-372. BMC Genomics. 2009. PMID: 19664281 Free PMC article.

5

Network visualization and analysis of gene expression data using BioLayout Express(3D).

Theocharidis A, van Dongen S, Enright AJ, Freeman TC. Theocharidis A, et al. Among authors: freeman tc. Nat Protoc. 2009;4(10):1535-50. doi: 10.1038/nprot.2009.177. Epub 2009 Oct 1. Nat Protoc. 2009. PMID: 19798086

6

Analysis of the transcriptional networks underpinning the activation of murine macrophages by inflammatory mediators.

Raza S, Barnett MW, Barnett-Itzhaki Z, Amit I, Hume DA, Freeman TC. Raza S, et al. Among authors: freeman tc. J Leukoc Biol. 2014 Aug;96(2):167-83. doi: 10.1189/jlb.6HI0313-169R. Epub 2014 Apr 10. J Leukoc Biol. 2014. PMID: 24721704 Free PMC article.

7

Extending signaling pathways with protein-interaction networks. Application to apoptosis.

Planas-Iglesias J, Guney E, García-García J, Robertson KA, Raza S, Freeman TC, Ghazal P, Oliva B. Planas-Iglesias J, et al. Among authors: freeman tc. OMICS. 2012 May;16(5):245-56. doi: 10.1089/omi.2011.0130. Epub 2012 Mar 2. OMICS. 2012. PMID: 22385281

8

A gene expression atlas of the domestic pig.

Freeman TC, Ivens A, Baillie JK, Beraldi D, Barnett MW, Dorward D, Downing A, Fairbairn L, Kapetanovic R, Raza S, Tomoiu A, Alberio R, Wu C, Su AI, Summers KM, Tuggle CK, Archibald AL, Hume DA. Freeman TC, et al. BMC Biol. 2012 Nov 15;10:90. doi: 10.1186/1741-7007-10-90. BMC Biol. 2012. PMID: 23153189 Free PMC article.

9

Co-expression of FBN1 with mesenchyme-specific genes in mouse cell lines: implications for phenotypic variability in Marfan syndrome.

Summers KM, Raza S, van Nimwegen E, Freeman TC, Hume DA. Summers KM, et al. Among authors: freeman tc. Eur J Hum Genet. 2010 Nov;18(11):1209-15. doi: 10.1038/ejhg.2010.91. Epub 2010 Jun 16. Eur J Hum Genet. 2010. PMID: 20551991 Free PMC article.

10

Functional clustering and lineage markers: insights into cellular differentiation and gene function from large-scale microarray studies of purified primary cell populations.

Hume DA, Summers KM, Raza S, Baillie JK, Freeman TC. Hume DA, et al. Among authors: freeman tc. Genomics. 2010 Jun;95(6):328-38. doi: 10.1016/j.ygeno.2010.03.002. Epub 2010 Mar 6. Genomics. 2010. PMID: 20211243 Free article.

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