Zhang Z - Search Results

1

Exploiting the determinants of stochastic gene expression in Saccharomyces cerevisiae for genome-wide prediction of expression noise.

Li J, Min R, Vizeacoumar FJ, Jin K, Xin X, Zhang Z. Li J, et al. Among authors: zhang z. Proc Natl Acad Sci U S A. 2010 Jun 8;107(23):10472-7. doi: 10.1073/pnas.0914302107. Epub 2010 May 20. Proc Natl Acad Sci U S A. 2010. PMID: 20489180 Free PMC article.

2

Preferential regulation of duplicated genes by microRNAs in mammals.

Li J, Musso G, Zhang Z. Li J, et al. Among authors: zhang z. Genome Biol. 2008;9(8):R132. doi: 10.1186/gb-2008-9-8-r132. Epub 2008 Aug 26. Genome Biol. 2008. PMID: 18727826 Free PMC article.

3

Learned random-walk kernels and empirical-map kernels for protein sequence classification.

Min R, Bonner A, Li J, Zhang Z. Min R, et al. Among authors: zhang z. J Comput Biol. 2009 Mar;16(3):457-74. doi: 10.1089/cmb.2008.0031. J Comput Biol. 2009. PMID: 19254184

4

Transcriptome analysis of the central nervous system of the mollusc Lymnaea stagnalis.

Feng ZP, Zhang Z, van Kesteren RE, Straub VA, van Nierop P, Jin K, Nejatbakhsh N, Goldberg JI, Spencer GE, Yeoman MS, Wildering W, Coorssen JR, Croll RP, Buck LT, Syed NI, Smit AB. Feng ZP, et al. Among authors: zhang z. BMC Genomics. 2009 Sep 23;10:451. doi: 10.1186/1471-2164-10-451. BMC Genomics. 2009. PMID: 19775440 Free PMC article.

5

Evolution of an X-linked primate-specific micro RNA cluster.

Li J, Liu Y, Dong D, Zhang Z. Li J, et al. Among authors: zhang z. Mol Biol Evol. 2010 Mar;27(3):671-83. doi: 10.1093/molbev/msp284. Epub 2009 Nov 19. Mol Biol Evol. 2010. PMID: 19933172

6

A probabilistic framework to improve microrna target prediction by incorporating proteomics data.

Li J, Min R, Bonner A, Zhang Z. Li J, et al. Among authors: zhang z. J Bioinform Comput Biol. 2009 Dec;7(6):955-72. doi: 10.1142/s021972000900445x. J Bioinform Comput Biol. 2009. PMID: 20014473

7

Integrating high-throughput genetic interaction mapping and high-content screening to explore yeast spindle morphogenesis.

Vizeacoumar FJ, van Dyk N, S Vizeacoumar F, Cheung V, Li J, Sydorskyy Y, Case N, Li Z, Datti A, Nislow C, Raught B, Zhang Z, Frey B, Bloom K, Boone C, Andrews BJ. Vizeacoumar FJ, et al. Among authors: zhang z. J Cell Biol. 2010 Jan 11;188(1):69-81. doi: 10.1083/jcb.200909013. J Cell Biol. 2010. PMID: 20065090 Free PMC article.

8

Revisiting the contribution of cis-elements to expression divergence between duplicated genes: the role of chromatin structure.

Li J, Yuan Z, Zhang Z. Li J, et al. Among authors: zhang z. Mol Biol Evol. 2010 Jul;27(7):1461-6. doi: 10.1093/molbev/msq041. Epub 2010 Feb 5. Mol Biol Evol. 2010. PMID: 20139146

9

The evolutionary landscape of the chromatin modification machinery reveals lineage specific gains, expansions, and losses.

On T, Xiong X, Pu S, Turinsky A, Gong Y, Emili A, Zhang Z, Greenblatt J, Wodak SJ, Parkinson J. On T, et al. Among authors: zhang z. Proteins. 2010 Jul;78(9):2075-89. doi: 10.1002/prot.22723. Proteins. 2010. PMID: 20455264

10

Gene expression variations are predictive for stochastic noise.

Dong D, Shao X, Deng N, Zhang Z. Dong D, et al. Among authors: zhang z. Nucleic Acids Res. 2011 Jan;39(2):403-13. doi: 10.1093/nar/gkq844. Epub 2010 Sep 21. Nucleic Acids Res. 2011. PMID: 20860999 Free PMC article.

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