Stekel DJ - Search Results

1

De novo evolution of complex, global and hierarchical gene regulatory mechanisms.

Jenkins DJ, Stekel DJ. Jenkins DJ, et al. Among authors: stekel dj. J Mol Evol. 2010 Aug;71(2):128-40. doi: 10.1007/s00239-010-9369-4. Epub 2010 Aug 3. J Mol Evol. 2010. PMID: 20680619 Free PMC article.

2

Strong negative self regulation of prokaryotic transcription factors increases the intrinsic noise of protein expression.

Stekel DJ, Jenkins DJ. Stekel DJ, et al. BMC Syst Biol. 2008 Jan 18;2:6. doi: 10.1186/1752-0509-2-6. BMC Syst Biol. 2008. PMID: 18205926 Free PMC article.

3

Mathematical model of the Lux luminescence system in the terrestrial bacterium Photorhabdus luminescens.

Welham PA, Stekel DJ. Welham PA, et al. Among authors: stekel dj. Mol Biosyst. 2009 Jan;5(1):68-76. doi: 10.1039/b812094c. Epub 2008 Nov 4. Mol Biosyst. 2009. PMID: 19081933 Free article.

4

A new model for investigating the evolution of transcription control networks.

Jenkins DJ, Stekel DJ. Jenkins DJ, et al. Among authors: stekel dj. Artif Life. 2009 Summer;15(3):259-91. doi: 10.1162/artl.2009.Stekel.006. Artif Life. 2009. PMID: 19254178

5

Stochasticity versus determinism: consequences for realistic gene regulatory network modelling and evolution.

Jenkins DJ, Stekel DJ. Jenkins DJ, et al. Among authors: stekel dj. J Mol Evol. 2010 Feb;70(2):215-31. doi: 10.1007/s00239-010-9323-5. Epub 2010 Feb 12. J Mol Evol. 2010. PMID: 20151115

6

Evolution of resource and energy management in biologically realistic gene regulatory network models.

Stekel DJ, Jenkins DJ. Stekel DJ, et al. Adv Exp Med Biol. 2012;751:301-28. doi: 10.1007/978-1-4614-3567-9_14. Adv Exp Med Biol. 2012. PMID: 22821464

7

Adaptation for protein synthesis efficiency in a naturally occurring self-regulating operon.

Herman D, Thomas CM, Stekel DJ. Herman D, et al. Among authors: stekel dj. PLoS One. 2012;7(11):e49678. doi: 10.1371/journal.pone.0049678. Epub 2012 Nov 20. PLoS One. 2012. PMID: 23185406 Free PMC article.

8

Molecular circuits for associative learning in single-celled organisms.

Fernando CT, Liekens AM, Bingle LE, Beck C, Lenser T, Stekel DJ, Rowe JE. Fernando CT, et al. Among authors: stekel dj. J R Soc Interface. 2009 May 6;6(34):463-9. doi: 10.1098/rsif.2008.0344. Epub 2008 Oct 3. J R Soc Interface. 2009. PMID: 18835803 Free PMC article.

9

Inclusion of neighboring base interdependencies substantially improves genome-wide prokaryotic transcription factor binding site prediction.

Salama RA, Stekel DJ. Salama RA, et al. Among authors: stekel dj. Nucleic Acids Res. 2010 Jul;38(12):e135. doi: 10.1093/nar/gkq274. Epub 2010 May 3. Nucleic Acids Res. 2010. PMID: 20439311 Free PMC article.

10

Global transcription regulation of RK2 plasmids: a case study in the combined use of dynamical mathematical models and statistical inference for integration of experimental data and hypothesis exploration.

Herman D, Thomas CM, Stekel DJ. Herman D, et al. Among authors: stekel dj. BMC Syst Biol. 2011 Jul 29;5:119. doi: 10.1186/1752-0509-5-119. BMC Syst Biol. 2011. PMID: 21801369 Free PMC article.

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