Klauda JB - Search Results

1

Lipid chain branching at the iso- and anteiso-positions in complex Chlamydia membranes: a molecular dynamics study.

Lim JB, Klauda JB. Lim JB, et al. Among authors: klauda jb. Biochim Biophys Acta. 2011 Jan;1808(1):323-31. doi: 10.1016/j.bbamem.2010.07.036. Epub 2010 Aug 6. Biochim Biophys Acta. 2011. PMID: 20692231 Free article.

2

CHARMM-GUI Membrane Builder for mixed bilayers and its application to yeast membranes.

Jo S, Lim JB, Klauda JB, Im W. Jo S, et al. Among authors: klauda jb. Biophys J. 2009 Jul 8;97(1):50-8. doi: 10.1016/j.bpj.2009.04.013. Biophys J. 2009. PMID: 19580743 Free PMC article.

3

Update of the CHARMM all-atom additive force field for lipids: validation on six lipid types.

Klauda JB, Venable RM, Freites JA, O'Connor JW, Tobias DJ, Mondragon-Ramirez C, Vorobyov I, MacKerell AD Jr, Pastor RW. Klauda JB, et al. J Phys Chem B. 2010 Jun 17;114(23):7830-43. doi: 10.1021/jp101759q. J Phys Chem B. 2010. PMID: 20496934 Free PMC article.

4

Cholesterol flip-flop: insights from free energy simulation studies.

Jo S, Rui H, Lim JB, Klauda JB, Im W. Jo S, et al. Among authors: klauda jb. J Phys Chem B. 2010 Oct 28;114(42):13342-8. doi: 10.1021/jp108166k. J Phys Chem B. 2010. PMID: 20923227

5

Sterol binding and membrane lipid attachment to the Osh4 protein of yeast.

Rogaski B, Lim JB, Klauda JB. Rogaski B, et al. Among authors: klauda jb. J Phys Chem B. 2010 Oct 28;114(42):13562-73. doi: 10.1021/jp106890e. J Phys Chem B. 2010. PMID: 20925360

6

Lipid membranes with a majority of cholesterol: applications to the ocular lens and aquaporin 0.

O'Connor JW, Klauda JB. O'Connor JW, et al. Among authors: klauda jb. J Phys Chem B. 2011 May 26;115(20):6455-64. doi: 10.1021/jp108650u. Epub 2011 May 3. J Phys Chem B. 2011. PMID: 21539340

7

Update of the cholesterol force field parameters in CHARMM.

Lim JB, Rogaski B, Klauda JB. Lim JB, et al. Among authors: klauda jb. J Phys Chem B. 2012 Jan 12;116(1):203-10. doi: 10.1021/jp207925m. Epub 2011 Dec 19. J Phys Chem B. 2012. PMID: 22136112

8

Membrane models of E. coli containing cyclic moieties in the aliphatic lipid chain.

Pandit KR, Klauda JB. Pandit KR, et al. Among authors: klauda jb. Biochim Biophys Acta. 2012 May;1818(5):1205-10. doi: 10.1016/j.bbamem.2012.01.009. Epub 2012 Jan 18. Biochim Biophys Acta. 2012. PMID: 22274566 Free article.

9

Improving the CHARMM force field for polyunsaturated fatty acid chains.

Klauda JB, Monje V, Kim T, Im W. Klauda JB, et al. J Phys Chem B. 2012 Aug 9;116(31):9424-31. doi: 10.1021/jp304056p. Epub 2012 Jul 3. J Phys Chem B. 2012. PMID: 22697583

10

Membrane-binding mechanism of a peripheral membrane protein through microsecond molecular dynamics simulations.

Rogaski B, Klauda JB. Rogaski B, et al. Among authors: klauda jb. J Mol Biol. 2012 Nov 9;423(5):847-61. doi: 10.1016/j.jmb.2012.08.015. Epub 2012 Aug 25. J Mol Biol. 2012. PMID: 22925581

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