Grimm SA - Search Results

1

MapSplice: accurate mapping of RNA-seq reads for splice junction discovery.

Wang K, Singh D, Zeng Z, Coleman SJ, Huang Y, Savich GL, He X, Mieczkowski P, Grimm SA, Perou CM, MacLeod JN, Chiang DY, Prins JF, Liu J. Wang K, et al. Among authors: grimm sa. Nucleic Acids Res. 2010 Oct;38(18):e178. doi: 10.1093/nar/gkq622. Epub 2010 Aug 27. Nucleic Acids Res. 2010. PMID: 20802226 Free PMC article.

2

GATA3 zinc finger 2 mutations reprogram the breast cancer transcriptional network.

Takaku M, Grimm SA, Roberts JD, Chrysovergis K, Bennett BD, Myers P, Perera L, Tucker CJ, Perou CM, Wade PA. Takaku M, et al. Among authors: grimm sa. Nat Commun. 2018 Mar 13;9(1):1059. doi: 10.1038/s41467-018-03478-4. Nat Commun. 2018. PMID: 29535312 Free PMC article.

3

The Impact of Environmental and Endogenous Damage on Somatic Mutation Load in Human Skin Fibroblasts.

Saini N, Roberts SA, Klimczak LJ, Chan K, Grimm SA, Dai S, Fargo DC, Boyer JC, Kaufmann WK, Taylor JA, Lee E, Cortes-Ciriano I, Park PJ, Schurman SH, Malc EP, Mieczkowski PA, Gordenin DA. Saini N, et al. Among authors: grimm sa. PLoS Genet. 2016 Oct 27;12(10):e1006385. doi: 10.1371/journal.pgen.1006385. eCollection 2016 Oct. PLoS Genet. 2016. PMID: 27788131 Free PMC article. Clinical Trial.

4

Cancer-specific mutation of GATA3 disrupts the transcriptional regulatory network governed by Estrogen Receptor alpha, FOXA1 and GATA3.

Takaku M, Grimm SA, De Kumar B, Bennett BD, Wade PA. Takaku M, et al. Among authors: grimm sa. Nucleic Acids Res. 2020 May 21;48(9):4756-4768. doi: 10.1093/nar/gkaa179. Nucleic Acids Res. 2020. PMID: 32232341 Free PMC article.

5

DNA methylation profiling in human B cells reveals immune regulatory elements and epigenetic plasticity at Alu elements during B-cell activation.

Lai AY, Mav D, Shah R, Grimm SA, Phadke D, Hatzi K, Melnick A, Geigerman C, Sobol SE, Jaye DL, Wade PA. Lai AY, et al. Among authors: grimm sa. Genome Res. 2013 Dec;23(12):2030-41. doi: 10.1101/gr.155473.113. Epub 2013 Sep 6. Genome Res. 2013. PMID: 24013550 Free PMC article.

6

MBD3 localizes at promoters, gene bodies and enhancers of active genes.

Shimbo T, Du Y, Grimm SA, Dhasarathy A, Mav D, Shah RR, Shi H, Wade PA. Shimbo T, et al. Among authors: grimm sa. PLoS Genet. 2013;9(12):e1004028. doi: 10.1371/journal.pgen.1004028. Epub 2013 Dec 26. PLoS Genet. 2013. PMID: 24385926 Free PMC article.

7

Fine-tuning of epigenetic regulation with respect to promoter CpG content in a cell type-specific manner.

Li R, Mav D, Grimm SA, Jothi R, Shah R, Wade PA. Li R, et al. Among authors: grimm sa. Epigenetics. 2014 May;9(5):747-59. doi: 10.4161/epi.28075. Epub 2014 Feb 12. Epigenetics. 2014. PMID: 24521667 Free PMC article.

8

Obesity, rather than diet, drives epigenomic alterations in colonic epithelium resembling cancer progression.

Li R, Grimm SA, Chrysovergis K, Kosak J, Wang X, Du Y, Burkholder A, Janardhan K, Mav D, Shah R, Eling TE, Wade PA. Li R, et al. Among authors: grimm sa. Cell Metab. 2014 Apr 1;19(4):702-11. doi: 10.1016/j.cmet.2014.03.012. Cell Metab. 2014. PMID: 24703701 Free PMC article.

9

Breast tumor specific mutation in GATA3 affects physiological mechanisms regulating transcription factor turnover.

Adomas AB, Grimm SA, Malone C, Takaku M, Sims JK, Wade PA. Adomas AB, et al. Among authors: grimm sa. BMC Cancer. 2014 Apr 22;14:278. doi: 10.1186/1471-2407-14-278. BMC Cancer. 2014. PMID: 24758297 Free PMC article.

10

LIN28A Modulates Splicing and Gene Expression Programs in Breast Cancer Cells.

Yang J, Bennett BD, Luo S, Inoue K, Grimm SA, Schroth GP, Bushel PR, Kinyamu HK, Archer TK. Yang J, et al. Among authors: grimm sa. Mol Cell Biol. 2015 Sep;35(18):3225-43. doi: 10.1128/MCB.00426-15. Epub 2015 Jul 6. Mol Cell Biol. 2015. PMID: 26149387 Free PMC article.

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