Bombarely A - Search Results

1

The Sol Genomics Network (solgenomics.net): growing tomatoes using Perl.

Bombarely A, Menda N, Tecle IY, Buels RM, Strickler S, Fischer-York T, Pujar A, Leto J, Gosselin J, Mueller LA. Bombarely A, et al. Nucleic Acids Res. 2011 Jan;39(Database issue):D1149-55. doi: 10.1093/nar/gkq866. Epub 2010 Oct 8. Nucleic Acids Res. 2011. PMID: 20935049 Free PMC article.

2

The Sol Genomics Network (SGN)--from genotype to phenotype to breeding.

Fernandez-Pozo N, Menda N, Edwards JD, Saha S, Tecle IY, Strickler SR, Bombarely A, Fisher-York T, Pujar A, Foerster H, Yan A, Mueller LA. Fernandez-Pozo N, et al. Among authors: bombarely a. Nucleic Acids Res. 2015 Jan;43(Database issue):D1036-41. doi: 10.1093/nar/gku1195. Epub 2014 Nov 26. Nucleic Acids Res. 2015. PMID: 25428362 Free PMC article.

3

Designing a transcriptome next-generation sequencing project for a nonmodel plant species.

Strickler SR, Bombarely A, Mueller LA. Strickler SR, et al. Among authors: bombarely a. Am J Bot. 2012 Feb;99(2):257-66. doi: 10.3732/ajb.1100292. Epub 2012 Jan 19. Am J Bot. 2012. PMID: 22268224 Free article. Review.

4

A draft genome sequence of Nicotiana benthamiana to enhance molecular plant-microbe biology research.

Bombarely A, Rosli HG, Vrebalov J, Moffett P, Mueller LA, Martin GB. Bombarely A, et al. Mol Plant Microbe Interact. 2012 Dec;25(12):1523-30. doi: 10.1094/MPMI-06-12-0148-TA. Mol Plant Microbe Interact. 2012. PMID: 22876960 Free article.

5

Deciphering the complex leaf transcriptome of the allotetraploid species Nicotiana tabacum: a phylogenomic perspective.

Bombarely A, Edwards KD, Sanchez-Tamburrino J, Mueller LA. Bombarely A, et al. BMC Genomics. 2012 Aug 17;13:406. doi: 10.1186/1471-2164-13-406. BMC Genomics. 2012. PMID: 22900718 Free PMC article.

6

From manual curation to visualization of gene families and networks across Solanaceae plant species.

Pujar A, Menda N, Bombarely A, Edwards JD, Strickler SR, Mueller LA. Pujar A, et al. Among authors: bombarely a. Database (Oxford). 2013 May 15;2013:bat028. doi: 10.1093/database/bat028. Print 2013. Database (Oxford). 2013. PMID: 23681907 Free PMC article.

7

The Genome Database for Rosaceae (GDR): year 10 update.

Jung S, Ficklin SP, Lee T, Cheng CH, Blenda A, Zheng P, Yu J, Bombarely A, Cho I, Ru S, Evans K, Peace C, Abbott AG, Mueller LA, Olmstead MA, Main D. Jung S, et al. Among authors: bombarely a. Nucleic Acids Res. 2014 Jan;42(Database issue):D1237-44. doi: 10.1093/nar/gkt1012. Epub 2013 Nov 12. Nucleic Acids Res. 2014. PMID: 24225320 Free PMC article.

8

Comparative genomics and phylogenetic discordance of cultivated tomato and close wild relatives.

Strickler SR, Bombarely A, Munkvold JD, York T, Menda N, Martin GB, Mueller LA. Strickler SR, et al. Among authors: bombarely a. PeerJ. 2015 Feb 26;3:e793. doi: 10.7717/peerj.793. eCollection 2015. PeerJ. 2015. PMID: 25780758 Free PMC article.

9

SolCyc: a database hub at the Sol Genomics Network (SGN) for the manual curation of metabolic networks in Solanum and Nicotiana specific databases.

Foerster H, Bombarely A, Battey JND, Sierro N, Ivanov NV, Mueller LA. Foerster H, et al. Among authors: bombarely a. Database (Oxford). 2018 Jan 1;2018:bay035. doi: 10.1093/database/bay035. Database (Oxford). 2018. PMID: 29762652 Free PMC article.

10

Natural variation in stress response gene activity in the allopolyploid Arabidopsis suecica.

Carlson KD, Fernandez-Pozo N, Bombarely A, Pisupati R, Mueller LA, Madlung A. Carlson KD, et al. Among authors: bombarely a. BMC Genomics. 2017 Aug 23;18(1):653. doi: 10.1186/s12864-017-4067-x. BMC Genomics. 2017. PMID: 28830347 Free PMC article.

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