Liu T - Search Results

1

A classification model for G-to-A hypermutation in hepatitis B virus ultra-deep pyrosequencing reads.

Reuman EC, Margeridon-Thermet S, Caudill HB, Liu T, Borroto-Esoda K, Svarovskaia ES, Holmes SP, Shafer RW. Reuman EC, et al. Among authors: liu t. Bioinformatics. 2010 Dec 1;26(23):2929-32. doi: 10.1093/bioinformatics/btq570. Epub 2010 Oct 11. Bioinformatics. 2010. PMID: 20937597 Free PMC article.

2

The calibrated population resistance tool: standardized genotypic estimation of transmitted HIV-1 drug resistance.

Gifford RJ, Liu TF, Rhee SY, Kiuchi M, Hue S, Pillay D, Shafer RW. Gifford RJ, et al. Bioinformatics. 2009 May 1;25(9):1197-8. doi: 10.1093/bioinformatics/btp134. Epub 2009 Mar 20. Bioinformatics. 2009. PMID: 19304876 Free PMC article.

3

Low-level persistence of drug resistance mutations in hepatitis B virus-infected subjects with a past history of Lamivudine treatment.

Margeridon-Thermet S, Svarovskaia ES, Babrzadeh F, Martin R, Liu TF, Pacold M, Reuman EC, Holmes SP, Borroto-Esoda K, Shafer RW. Margeridon-Thermet S, et al. Antimicrob Agents Chemother. 2013 Jan;57(1):343-9. doi: 10.1128/AAC.01601-12. Epub 2012 Oct 31. Antimicrob Agents Chemother. 2013. PMID: 23114756 Free PMC article.

4

Ultra-deep pyrosequencing of hepatitis B virus quasispecies from nucleoside and nucleotide reverse-transcriptase inhibitor (NRTI)-treated patients and NRTI-naive patients.

Margeridon-Thermet S, Shulman NS, Ahmed A, Shahriar R, Liu T, Wang C, Holmes SP, Babrzadeh F, Gharizadeh B, Hanczaruk B, Simen BB, Egholm M, Shafer RW. Margeridon-Thermet S, et al. Among authors: liu t. J Infect Dis. 2009 May 1;199(9):1275-85. doi: 10.1086/597808. J Infect Dis. 2009. PMID: 19301976 Free PMC article.

5

Web resources for HIV type 1 genotypic-resistance test interpretation.

Liu TF, Shafer RW. Liu TF, et al. Clin Infect Dis. 2006 Jun 1;42(11):1608-18. doi: 10.1086/503914. Epub 2006 Apr 28. Clin Infect Dis. 2006. PMID: 16652319 Free PMC article.

6

HIV-1 subtype B protease and reverse transcriptase amino acid covariation.

Rhee SY, Liu TF, Holmes SP, Shafer RW. Rhee SY, et al. PLoS Comput Biol. 2007 May;3(5):e87. doi: 10.1371/journal.pcbi.0030087. PLoS Comput Biol. 2007. PMID: 17500586 Free PMC article.

7

Prevalence of darunavir resistance-associated mutations: patterns of occurrence and association with past treatment.

Mitsuya Y, Liu TF, Rhee SY, Fessel WJ, Shafer RW. Mitsuya Y, et al. J Infect Dis. 2007 Oct 15;196(8):1177-9. doi: 10.1086/521624. Epub 2007 Sep 10. J Infect Dis. 2007. PMID: 17955436 Free PMC article.

8

Sequence editing by Apolipoprotein B RNA-editing catalytic component [corrected] and epidemiological surveillance of transmitted HIV-1 drug resistance.

Gifford RJ, Rhee SY, Eriksson N, Liu TF, Kiuchi M, Das AK, Shafer RW. Gifford RJ, et al. AIDS. 2008 Mar 30;22(6):717-25. doi: 10.1097/QAD.0b013e3282f5e07a. AIDS. 2008. PMID: 18356601 Free PMC article.

9

Natural variation of HIV-1 group M integrase: implications for a new class of antiretroviral inhibitors.

Rhee SY, Liu TF, Kiuchi M, Zioni R, Gifford RJ, Holmes SP, Shafer RW. Rhee SY, et al. Retrovirology. 2008 Aug 7;5:74. doi: 10.1186/1742-4690-5-74. Retrovirology. 2008. PMID: 18687142 Free PMC article.

10

Minority human immunodeficiency virus type 1 variants in antiretroviral-naive persons with reverse transcriptase codon 215 revertant mutations.

Mitsuya Y, Varghese V, Wang C, Liu TF, Holmes SP, Jayakumar P, Gharizadeh B, Ronaghi M, Klein D, Fessel WJ, Shafer RW. Mitsuya Y, et al. J Virol. 2008 Nov;82(21):10747-55. doi: 10.1128/JVI.01827-07. Epub 2008 Aug 20. J Virol. 2008. PMID: 18715933 Free PMC article.

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