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Analysis of binding properties and specificity through identification of the interface forming residues (IFR) for serine proteases in silico docked to different inhibitors.
Ribeiro C, Togawa RC, Neshich IA, Mazoni I, Mancini AL, Minardi RC, da Silveira CH, Jardine JG, Santoro MM, Neshich G. Ribeiro C, et al. Among authors: neshich g, neshich ia. BMC Struct Biol. 2010 Oct 20;10:36. doi: 10.1186/1472-6807-10-36. BMC Struct Biol. 2010. PMID: 20961427 Free PMC article.
Improving predictions of protein-protein interfaces by combining amino acid-specific classifiers based on structural and physicochemical descriptors with their weighted neighbor averages.
de Moraes FR, Neshich IA, Mazoni I, Yano IH, Pereira JG, Salim JA, Jardine JG, Neshich G. de Moraes FR, et al. Among authors: neshich g. PLoS One. 2014 Jan 28;9(1):e87107. doi: 10.1371/journal.pone.0087107. eCollection 2014. PLoS One. 2014. PMID: 24489849 Free PMC article.
The Diamond STING server.
Neshich G, Borro LC, Higa RH, Kuser PR, Yamagishi ME, Franco EH, Krauchenco JN, Fileto R, Ribeiro AA, Bezerra GB, Velludo TM, Jimenez TS, Furukawa N, Teshima H, Kitajima K, Bava A, Sarai A, Togawa RC, Mancini AL. Neshich G, et al. Nucleic Acids Res. 2005 Jul 1;33(Web Server issue):W29-35. doi: 10.1093/nar/gki397. Nucleic Acids Res. 2005. PMID: 15980473 Free PMC article.
45 results