Gerstein MB - Search Results

1

FusionSeq: a modular framework for finding gene fusions by analyzing paired-end RNA-sequencing data.

Sboner A, Habegger L, Pflueger D, Terry S, Chen DZ, Rozowsky JS, Tewari AK, Kitabayashi N, Moss BJ, Chee MS, Demichelis F, Rubin MA, Gerstein MB. Sboner A, et al. Among authors: gerstein mb. Genome Biol. 2010;11(10):R104. doi: 10.1186/gb-2010-11-10-r104. Epub 2010 Oct 21. Genome Biol. 2010. PMID: 20964841 Free PMC article.

2

Comparing protein abundance and mRNA expression levels on a genomic scale.

Greenbaum D, Colangelo C, Williams K, Gerstein M. Greenbaum D, et al. Genome Biol. 2003;4(9):117. doi: 10.1186/gb-2003-4-9-117. Epub 2003 Aug 29. Genome Biol. 2003. PMID: 12952525 Free PMC article. Review.

3

Major molecular differences between mammalian sexes are involved in drug metabolism and renal function.

Rinn JL, Rozowsky JS, Laurenzi IJ, Petersen PH, Zou K, Zhong W, Gerstein M, Snyder M. Rinn JL, et al. Dev Cell. 2004 Jun;6(6):791-800. doi: 10.1016/j.devcel.2004.05.005. Dev Cell. 2004. PMID: 15177028 Free article.

4

Global identification of human transcribed sequences with genome tiling arrays.

Bertone P, Stolc V, Royce TE, Rozowsky JS, Urban AE, Zhu X, Rinn JL, Tongprasit W, Samanta M, Weissman S, Gerstein M, Snyder M. Bertone P, et al. Science. 2004 Dec 24;306(5705):2242-6. doi: 10.1126/science.1103388. Epub 2004 Nov 11. Science. 2004. PMID: 15539566

5

Multi-species microarrays reveal the effect of sequence divergence on gene expression profiles.

Gilad Y, Rifkin SA, Bertone P, Gerstein M, White KP. Gilad Y, et al. Genome Res. 2005 May;15(5):674-80. doi: 10.1101/gr.3335705. Genome Res. 2005. PMID: 15867429 Free PMC article.

6

Issues in the analysis of oligonucleotide tiling microarrays for transcript mapping.

Royce TE, Rozowsky JS, Bertone P, Samanta M, Stolc V, Weissman S, Snyder M, Gerstein M. Royce TE, et al. Trends Genet. 2005 Aug;21(8):466-75. doi: 10.1016/j.tig.2005.06.007. Trends Genet. 2005. PMID: 15979196 Free PMC article. Review.

7

Design optimization methods for genomic DNA tiling arrays.

Bertone P, Trifonov V, Rozowsky JS, Schubert F, Emanuelsson O, Karro J, Kao MY, Snyder M, Gerstein M. Bertone P, et al. Genome Res. 2006 Feb;16(2):271-81. doi: 10.1101/gr.4452906. Epub 2005 Dec 19. Genome Res. 2006. PMID: 16365382 Free PMC article.

8

Extrapolating traditional DNA microarray statistics to tiling and protein microarray technologies.

Royce TE, Rozowsky JS, Luscombe NM, Emanuelsson O, Yu H, Zhu X, Snyder M, Gerstein MB. Royce TE, et al. Among authors: gerstein mb. Methods Enzymol. 2006;411:282-311. doi: 10.1016/S0076-6879(06)11015-0. Methods Enzymol. 2006. PMID: 16939796 Review.

9

A supervised hidden markov model framework for efficiently segmenting tiling array data in transcriptional and chIP-chip experiments: systematically incorporating validated biological knowledge.

Du J, Rozowsky JS, Korbel JO, Zhang ZD, Royce TE, Schultz MH, Snyder M, Gerstein M. Du J, et al. Bioinformatics. 2006 Dec 15;22(24):3016-24. doi: 10.1093/bioinformatics/btl515. Epub 2006 Oct 12. Bioinformatics. 2006. PMID: 17038339

10

Assessing the performance of different high-density tiling microarray strategies for mapping transcribed regions of the human genome.

Emanuelsson O, Nagalakshmi U, Zheng D, Rozowsky JS, Urban AE, Du J, Lian Z, Stolc V, Weissman S, Snyder M, Gerstein MB. Emanuelsson O, et al. Among authors: gerstein mb. Genome Res. 2007 Jun;17(6):886-97. doi: 10.1101/gr.5014606. Epub 2006 Nov 21. Genome Res. 2007. PMID: 17119069 Free PMC article.

Save citations to file

Email citations

Send citations to clipboard

Add to Collections

Add to My Bibliography

Create a file for external citation management software

Your saved search

Your RSS Feed

My Custom Filters

Publication date

Text availability

Article attribute

Article type

Article Language

Species

Sex

Age

Other

658 results

Search Page

Filters