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Page 1
GPCRDB: information system for G protein-coupled receptors.
Vroling B, Sanders M, Baakman C, Borrmann A, Verhoeven S, Klomp J, Oliveira L, de Vlieg J, Vriend G. Vroling B, et al. Among authors: baakman c. Nucleic Acids Res. 2011 Jan;39(Database issue):D309-19. doi: 10.1093/nar/gkq1009. Epub 2010 Nov 2. Nucleic Acids Res. 2011. PMID: 21045054 Free PMC article.
Homology modelling and spectroscopy, a never-ending love story.
Venselaar H, Joosten RP, Vroling B, Baakman CA, Hekkelman ML, Krieger E, Vriend G. Venselaar H, et al. Among authors: baakman ca. Eur Biophys J. 2010 Mar;39(4):551-63. doi: 10.1007/s00249-009-0531-0. Epub 2009 Aug 29. Eur Biophys J. 2010. PMID: 19718498 Free PMC article. Review.
Systematic generation of in vivo G protein-coupled receptor mutants in the rat.
van Boxtel R, Vroling B, Toonen P, Nijman IJ, van Roekel H, Verheul M, Baakman C, Guryev V, Vriend G, Cuppen E. van Boxtel R, et al. Among authors: baakman c. Pharmacogenomics J. 2011 Oct;11(5):326-36. doi: 10.1038/tpj.2010.44. Epub 2010 Jun 8. Pharmacogenomics J. 2011. PMID: 20531371 Free PMC article.
A series of PDB-related databanks for everyday needs.
Touw WG, Baakman C, Black J, te Beek TA, Krieger E, Joosten RP, Vriend G. Touw WG, et al. Among authors: baakman c. Nucleic Acids Res. 2015 Jan;43(Database issue):D364-8. doi: 10.1093/nar/gku1028. Epub 2014 Oct 28. Nucleic Acids Res. 2015. PMID: 25352545 Free PMC article.
NewProt - a protein engineering portal.
Schwarte A, Genz M, Skalden L, Nobili A, Vickers C, Melse O, Kuipers R, Joosten HJ, Stourac J, Bendl J, Black J, Haase P, Baakman C, Damborsky J, Bornscheuer U, Vriend G, Venselaar H. Schwarte A, et al. Among authors: baakman c. Protein Eng Des Sel. 2017 Jun 1;30(6):441-447. doi: 10.1093/protein/gzx024. Protein Eng Des Sel. 2017. PMID: 28475759
Facilities that make the PDB data collection more powerful.
Lange J, Baakman C, Pistorius A, Krieger E, Hooft R, Joosten RP, Vriend G. Lange J, et al. Among authors: baakman c. Protein Sci. 2020 Jan;29(1):330-344. doi: 10.1002/pro.3788. Epub 2019 Dec 2. Protein Sci. 2020. PMID: 31724231 Free PMC article.