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Automated alphabet reduction for protein datasets.
Bacardit J, Stout M, Hirst JD, Valencia A, Smith RE, Krasnogor N. Bacardit J, et al. Among authors: valencia a. BMC Bioinformatics. 2009 Jan 6;10:6. doi: 10.1186/1471-2105-10-6. BMC Bioinformatics. 2009. PMID: 19126227 Free PMC article.
From cancer genomes to cancer models: bridging the gaps.
Baudot A, Real FX, Izarzugaza JM, Valencia A. Baudot A, et al. Among authors: valencia a. EMBO Rep. 2009 Apr;10(4):359-66. doi: 10.1038/embor.2009.46. Epub 2009 Mar 20. EMBO Rep. 2009. PMID: 19305388 Free PMC article. Review.
Translational disease interpretation with molecular networks.
Baudot A, Gómez-López G, Valencia A. Baudot A, et al. Among authors: valencia a. Genome Biol. 2009;10(6):221. doi: 10.1186/gb-2009-10-6-221. Epub 2009 Jun 29. Genome Biol. 2009. PMID: 19591646 Free PMC article. Review.
TopoGSA: network topological gene set analysis.
Glaab E, Baudot A, Krasnogor N, Valencia A. Glaab E, et al. Among authors: valencia a. Bioinformatics. 2010 May 1;26(9):1271-2. doi: 10.1093/bioinformatics/btq131. Epub 2010 Mar 24. Bioinformatics. 2010. PMID: 20335277 Free PMC article.
Mutated genes, pathways and processes in tumours.
Baudot A, de la Torre V, Valencia A. Baudot A, et al. Among authors: valencia a. EMBO Rep. 2010 Oct;11(10):805-10. doi: 10.1038/embor.2010.133. Epub 2010 Sep 17. EMBO Rep. 2010. PMID: 20847737 Free PMC article.
No paradox, no progress: inverse cancer comorbidity in people with other complex diseases.
Tabarés-Seisdedos R, Dumont N, Baudot A, Valderas JM, Climent J, Valencia A, Crespo-Facorro B, Vieta E, Gómez-Beneyto M, Martínez S, Rubenstein JL. Tabarés-Seisdedos R, et al. Among authors: valencia a. Lancet Oncol. 2011 Jun;12(6):604-8. doi: 10.1016/S1470-2045(11)70041-9. Epub 2011 Apr 15. Lancet Oncol. 2011. PMID: 21498115 Review.
EnrichNet: network-based gene set enrichment analysis.
Glaab E, Baudot A, Krasnogor N, Schneider R, Valencia A. Glaab E, et al. Among authors: valencia a. Bioinformatics. 2012 Sep 15;28(18):i451-i457. doi: 10.1093/bioinformatics/bts389. Bioinformatics. 2012. PMID: 22962466 Free PMC article.
957 results