de Beer TA - Search Results

1

Sequence-based prediction for vaccine strain selection and identification of antigenic variability in foot-and-mouth disease virus.

Reeve R, Blignaut B, Esterhuysen JJ, Opperman P, Matthews L, Fry EE, de Beer TA, Theron J, Rieder E, Vosloo W, O'Neill HG, Haydon DT, Maree FF. Reeve R, et al. Among authors: de beer ta. PLoS Comput Biol. 2010 Dec 9;6(12):e1001027. doi: 10.1371/journal.pcbi.1001027. PLoS Comput Biol. 2010. PMID: 21151576 Free PMC article.

2

Predicting antigenic sites on the foot-and-mouth disease virus capsid of the South African Territories types using virus neutralization data.

Maree FF, Blignaut B, Esterhuysen JJ, de Beer TAP, Theron J, O'Neill HG, Rieder E. Maree FF, et al. J Gen Virol. 2011 Oct;92(Pt 10):2297-2309. doi: 10.1099/vir.0.032839-0. Epub 2011 Jun 22. J Gen Virol. 2011. PMID: 21697350

3

Genetic heterogeneity in the leader and P1-coding regions of foot-and-mouth disease virus serotypes A and O in Africa.

Chitray M, de Beer TA, Vosloo W, Maree FF. Chitray M, et al. Among authors: de beer ta. Arch Virol. 2014 May;159(5):947-61. doi: 10.1007/s00705-013-1838-9. Epub 2013 Nov 13. Arch Virol. 2014. PMID: 24221247 Free PMC article.

4

Determination of common genetic variants within the non-structural proteins of foot-and-mouth disease viruses isolated in sub-Saharan Africa.

Nsamba P, de Beer TA, Chitray M, Scott K, Vosloo W, Maree FF. Nsamba P, et al. Among authors: de beer ta. Vet Microbiol. 2015 May 15;177(1-2):106-22. doi: 10.1016/j.vetmic.2015.03.007. Epub 2015 Mar 14. Vet Microbiol. 2015. PMID: 25818579

5

Mapping of amino acid residues responsible for adhesion of cell culture-adapted foot-and-mouth disease SAT type viruses.

Maree FF, Blignaut B, de Beer TA, Visser N, Rieder EA. Maree FF, et al. Among authors: de beer ta. Virus Res. 2010 Oct;153(1):82-91. doi: 10.1016/j.virusres.2010.07.010. Epub 2010 Jul 15. Virus Res. 2010. PMID: 20637812

6

Analysis of SAT type foot-and-mouth disease virus capsid proteins and the identification of putative amino acid residues affecting virus stability.

Maree FF, Blignaut B, de Beer TA, Rieder E. Maree FF, et al. Among authors: de beer ta. PLoS One. 2013 May 22;8(5):e61612. doi: 10.1371/journal.pone.0061612. Print 2013. PLoS One. 2013. PMID: 23717387 Free PMC article.

7

Synthesis of empty african horse sickness virus particles.

Maree S, Maree FF, Putterill JF, de Beer TAP, Huismans H, Theron J. Maree S, et al. Among authors: de beer tap. Virus Res. 2016 Feb 2;213:184-194. doi: 10.1016/j.virusres.2015.12.006. Epub 2015 Dec 10. Virus Res. 2016. PMID: 26686484

8

Amino acid changes in disease-associated variants differ radically from variants observed in the 1000 genomes project dataset.

de Beer TA, Laskowski RA, Parks SL, Sipos B, Goldman N, Thornton JM. de Beer TA, et al. PLoS Comput Biol. 2013;9(12):e1003382. doi: 10.1371/journal.pcbi.1003382. Epub 2013 Dec 12. PLoS Comput Biol. 2013. PMID: 24348229 Free PMC article.

9

Insight into neutral and disease-associated human genetic variants through interpretable predictors.

van den Berg BA, Reinders MJ, de Ridder D, de Beer TA. van den Berg BA, et al. Among authors: de beer ta. PLoS One. 2015 Mar 31;10(3):e0120729. doi: 10.1371/journal.pone.0120729. eCollection 2015. PLoS One. 2015. PMID: 25826299 Free PMC article.

10

PDBsum additions.

de Beer TA, Berka K, Thornton JM, Laskowski RA. de Beer TA, et al. Nucleic Acids Res. 2014 Jan;42(Database issue):D292-6. doi: 10.1093/nar/gkt940. Epub 2013 Oct 22. Nucleic Acids Res. 2014. PMID: 24153109 Free PMC article.

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