Nelson RT - Search Results

1

Gene expression patterns are correlated with genomic and genic structure in soybean.

Woody JL, Severin AJ, Bolon YT, Joseph B, Diers BW, Farmer AD, Weeks N, Muehlbauer GJ, Nelson RT, Grant D, Specht JE, Graham MA, Cannon SB, May GD, Vance CP, Shoemaker RC. Woody JL, et al. Among authors: nelson rt. Genome. 2011 Jan;54(1):10-8. doi: 10.1139/G10-090. Genome. 2011. PMID: 21217801

2

ESTminer: a suite of programs for gene and allele identification.

Nelson RT, Grant D, Shoemaker RC. Nelson RT, et al. Bioinformatics. 2005 Mar 1;21(5):691-3. doi: 10.1093/bioinformatics/bti075. Epub 2004 Nov 5. Bioinformatics. 2005. PMID: 15531616

3

Identification and analysis of gene families from the duplicated genome of soybean using EST sequences.

Nelson RT, Shoemaker R. Nelson RT, et al. BMC Genomics. 2006 Aug 9;7:204. doi: 10.1186/1471-2164-7-204. BMC Genomics. 2006. PMID: 16899135 Free PMC article. Review.

4

Distinct biphasic mRNA changes in response to Asian soybean rust infection.

van de Mortel M, Recknor JC, Graham MA, Nettleton D, Dittman JD, Nelson RT, Godoy CV, Abdelnoor RV, Almeida AM, Baum TJ, Whitham SA. van de Mortel M, et al. Among authors: nelson rt. Mol Plant Microbe Interact. 2007 Aug;20(8):887-99. doi: 10.1094/MPMI-20-8-0887. Mol Plant Microbe Interact. 2007. PMID: 17722693 Free article.

5

Gene duplication and paleopolyploidy in soybean and the implications for whole genome sequencing.

Schlueter JA, Lin JY, Schlueter SD, Vasylenko-Sanders IF, Deshpande S, Yi J, O'Bleness M, Roe BA, Nelson RT, Scheffler BE, Jackson SA, Shoemaker RC. Schlueter JA, et al. Among authors: nelson rt. BMC Genomics. 2007 Sep 19;8:330. doi: 10.1186/1471-2164-8-330. BMC Genomics. 2007. PMID: 17880721 Free PMC article.

6

Microsatellite discovery from BAC end sequences and genetic mapping to anchor the soybean physical and genetic maps.

Shoemaker RC, Grant D, Olson T, Warren WC, Wing R, Yu Y, Kim H, Cregan P, Joseph B, Futrell-Griggs M, Nelson W, Davito J, Walker J, Wallis J, Kremitski C, Scheer D, Clifton SW, Graves T, Nguyen H, Wu X, Luo M, Dvorak J, Nelson R, Cannon S, Tomkins J, Schmutz J, Stacey G, Jackson S. Shoemaker RC, et al. Genome. 2008 Apr;51(4):294-302. doi: 10.1139/G08-010. Genome. 2008. PMID: 18356965

7

Integrating microarray analysis and the soybean genome to understand the soybeans iron deficiency response.

O'Rourke JA, Nelson RT, Grant D, Schmutz J, Grimwood J, Cannon S, Vance CP, Graham MA, Shoemaker RC. O'Rourke JA, et al. Among authors: nelson rt. BMC Genomics. 2009 Aug 13;10:376. doi: 10.1186/1471-2164-10-376. BMC Genomics. 2009. PMID: 19678937 Free PMC article.

8

SoyBase, the USDA-ARS soybean genetics and genomics database.

Grant D, Nelson RT, Cannon SB, Shoemaker RC. Grant D, et al. Among authors: nelson rt. Nucleic Acids Res. 2010 Jan;38(Database issue):D843-6. doi: 10.1093/nar/gkp798. Epub 2009 Dec 14. Nucleic Acids Res. 2010. PMID: 20008513 Free PMC article.

9

SoyTEdb: a comprehensive database of transposable elements in the soybean genome.

Du J, Grant D, Tian Z, Nelson RT, Zhu L, Shoemaker RC, Ma J. Du J, et al. Among authors: nelson rt. BMC Genomics. 2010 Feb 17;11:113. doi: 10.1186/1471-2164-11-113. BMC Genomics. 2010. PMID: 20163715 Free PMC article.

10

Applications and methods utilizing the Simple Semantic Web Architecture and Protocol (SSWAP) for bioinformatics resource discovery and disparate data and service integration.

Nelson RT, Avraham S, Shoemaker RC, May GD, Ware D, Gessler DD. Nelson RT, et al. BioData Min. 2010 Jun 4;3(1):3. doi: 10.1186/1756-0381-3-3. BioData Min. 2010. PMID: 20525377 Free PMC article.

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