Bahar I - Search Results

1

ProDy: protein dynamics inferred from theory and experiments.

Bakan A, Meireles LM, Bahar I. Bakan A, et al. Among authors: bahar i. Bioinformatics. 2011 Jun 1;27(11):1575-7. doi: 10.1093/bioinformatics/btr168. Epub 2011 Apr 5. Bioinformatics. 2011. PMID: 21471012 Free PMC article.

2

Computing the transition state populations in simple protein models.

Ozkan SB, Dill KA, Bahar I. Ozkan SB, et al. Among authors: bahar i. Biopolymers. 2003 Jan;68(1):35-46. doi: 10.1002/bip.10280. Biopolymers. 2003. PMID: 12579578

3

Mining frequent patterns in protein structures: a study of protease families.

Chen SC, Bahar I. Chen SC, et al. Among authors: bahar i. Bioinformatics. 2004 Aug 4;20 Suppl 1(Suppl 1):i77-85. doi: 10.1093/bioinformatics/bth912. Bioinformatics. 2004. PMID: 15262784 Free PMC article.

4

A sequence alignment-independent method for protein classification.

Vries JK, Munshi R, Tobi D, Klein-Seetharaman J, Benos PV, Bahar I. Vries JK, et al. Among authors: bahar i. Appl Bioinformatics. 2004;3(2-3):137-48. doi: 10.2165/00822942-200403020-00008. Appl Bioinformatics. 2004. PMID: 15693739

5

iGNM: a database of protein functional motions based on Gaussian Network Model.

Yang LW, Liu X, Jursa CJ, Holliman M, Rader AJ, Karimi HA, Bahar I. Yang LW, et al. Among authors: bahar i. Bioinformatics. 2005 Jul 1;21(13):2978-87. doi: 10.1093/bioinformatics/bti469. Epub 2005 Apr 28. Bioinformatics. 2005. PMID: 15860562 Free PMC article.

6

oGNM: online computation of structural dynamics using the Gaussian Network Model.

Yang LW, Rader AJ, Liu X, Jursa CJ, Chen SC, Karimi HA, Bahar I. Yang LW, et al. Among authors: bahar i. Nucleic Acids Res. 2006 Jul 1;34(Web Server issue):W24-31. doi: 10.1093/nar/gkl084. Nucleic Acids Res. 2006. PMID: 16845002 Free PMC article.

7

Anisotropic network model: systematic evaluation and a new web interface.

Eyal E, Yang LW, Bahar I. Eyal E, et al. Among authors: bahar i. Bioinformatics. 2006 Nov 1;22(21):2619-27. doi: 10.1093/bioinformatics/btl448. Epub 2006 Aug 23. Bioinformatics. 2006. PMID: 16928735

8

Rapid assessment of correlated amino acids from pair-to-pair (P2P) substitution matrices.

Eyal E, Pietrokovski S, Bahar I. Eyal E, et al. Among authors: bahar i. Bioinformatics. 2007 Jul 15;23(14):1837-9. doi: 10.1093/bioinformatics/btm256. Epub 2007 May 12. Bioinformatics. 2007. PMID: 17496318

9

Structurally unique inhibitors of human mitogen-activated protein kinase phosphatase-1 identified in a pyrrole carboxamide library.

Lazo JS, Skoko JJ, Werner S, Mitasev B, Bakan A, Koizumi F, Yellow-Duke A, Bahar I, Brummond KM. Lazo JS, et al. Among authors: bahar i. J Pharmacol Exp Ther. 2007 Sep;322(3):940-7. doi: 10.1124/jpet.107.122242. Epub 2007 May 30. J Pharmacol Exp Ther. 2007. PMID: 17538006

10

Insights into equilibrium dynamics of proteins from comparison of NMR and X-ray data with computational predictions.

Yang LW, Eyal E, Chennubhotla C, Jee J, Gronenborn AM, Bahar I. Yang LW, et al. Among authors: bahar i. Structure. 2007 Jun;15(6):741-9. doi: 10.1016/j.str.2007.04.014. Structure. 2007. PMID: 17562320 Free PMC article.

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