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Meeting report of the RNA Ontology Consortium January 8-9, 2011.
Birmingham A, Clemente JC, Desai N, Gilbert J, Gonzalez A, Kyrpides N, Meyer F, Nawrocki E, Sterk P, Stombaugh J, Weinberg Z, Wendel D, Leontis NB, Zirbel C, Knight R, Laederach A. Birmingham A, et al. Among authors: stombaugh j. Stand Genomic Sci. 2011 Apr 29;4(2):252-6. doi: 10.4056/sigs.1724282. Stand Genomic Sci. 2011. PMID: 21677862 Free PMC article.
The RNA structure alignment ontology.
Brown JW, Birmingham A, Griffiths PE, Jossinet F, Kachouri-Lafond R, Knight R, Lang BF, Leontis N, Steger G, Stombaugh J, Westhof E. Brown JW, et al. Among authors: stombaugh j. RNA. 2009 Sep;15(9):1623-31. doi: 10.1261/rna.1601409. Epub 2009 Jul 21. RNA. 2009. PMID: 19622678 Free PMC article.
Frequency and isostericity of RNA base pairs.
Stombaugh J, Zirbel CL, Westhof E, Leontis NB. Stombaugh J, et al. Nucleic Acids Res. 2009 Apr;37(7):2294-312. doi: 10.1093/nar/gkp011. Epub 2009 Feb 24. Nucleic Acids Res. 2009. PMID: 19240142 Free PMC article.
Sharing and archiving nucleic acid structure mapping data.
Rocca-Serra P, Bellaousov S, Birmingham A, Chen C, Cordero P, Das R, Davis-Neulander L, Duncan CD, Halvorsen M, Knight R, Leontis NB, Mathews DH, Ritz J, Stombaugh J, Weeks KM, Zirbel CL, Laederach A. Rocca-Serra P, et al. Among authors: stombaugh j. RNA. 2011 Jul;17(7):1204-12. doi: 10.1261/rna.2753211. Epub 2011 May 24. RNA. 2011. PMID: 21610212 Free PMC article.
Boulder ALignment Editor (ALE): a web-based RNA alignment tool.
Stombaugh J, Widmann J, McDonald D, Knight R. Stombaugh J, et al. Bioinformatics. 2011 Jun 15;27(12):1706-7. doi: 10.1093/bioinformatics/btr258. Epub 2011 May 5. Bioinformatics. 2011. PMID: 21546392 Free PMC article.
40 results