Eng JK - Search Results

1

iProphet: multi-level integrative analysis of shotgun proteomic data improves peptide and protein identification rates and error estimates.

Shteynberg D, Deutsch EW, Lam H, Eng JK, Sun Z, Tasman N, Mendoza L, Moritz RL, Aebersold R, Nesvizhskii AI. Shteynberg D, et al. Among authors: eng jk. Mol Cell Proteomics. 2011 Dec;10(12):M111.007690. doi: 10.1074/mcp.M111.007690. Epub 2011 Aug 29. Mol Cell Proteomics. 2011. PMID: 21876204 Free PMC article.

2

High throughput protein characterization by automated reverse-phase chromatography/electrospray tandem mass spectrometry.

Ducret A, Van Oostveen I, Eng JK, Yates JR 3rd, Aebersold R. Ducret A, et al. Among authors: eng jk. Protein Sci. 1998 Mar;7(3):706-19. doi: 10.1002/pro.5560070320. Protein Sci. 1998. PMID: 9541403 Free PMC article.

3

Integrated genomic and proteomic analyses of a systematically perturbed metabolic network.

Ideker T, Thorsson V, Ranish JA, Christmas R, Buhler J, Eng JK, Bumgarner R, Goodlett DR, Aebersold R, Hood L. Ideker T, et al. Among authors: eng jk. Science. 2001 May 4;292(5518):929-34. doi: 10.1126/science.292.5518.929. Science. 2001. PMID: 11340206

4

Differential stable isotope labeling of peptides for quantitation and de novo sequence derivation.

Goodlett DR, Keller A, Watts JD, Newitt R, Yi EC, Purvine S, Eng JK, von Haller P, Aebersold R, Kolker E. Goodlett DR, et al. Among authors: eng jk. Rapid Commun Mass Spectrom. 2001;15(14):1214-21. doi: 10.1002/rcm.362. Rapid Commun Mass Spectrom. 2001. PMID: 11445905

5

Quantitative profiling of differentiation-induced microsomal proteins using isotope-coded affinity tags and mass spectrometry.

Han DK, Eng J, Zhou H, Aebersold R. Han DK, et al. Nat Biotechnol. 2001 Oct;19(10):946-51. doi: 10.1038/nbt1001-946. Nat Biotechnol. 2001. PMID: 11581660 Free PMC article.

6

Complementary profiling of gene expression at the transcriptome and proteome levels in Saccharomyces cerevisiae.

Griffin TJ, Gygi SP, Ideker T, Rist B, Eng J, Hood L, Aebersold R. Griffin TJ, et al. Mol Cell Proteomics. 2002 Apr;1(4):323-33. doi: 10.1074/mcp.m200001-mcp200. Mol Cell Proteomics. 2002. PMID: 12096114 Free article.

7

The study of macromolecular complexes by quantitative proteomics.

Ranish JA, Yi EC, Leslie DM, Purvine SO, Goodlett DR, Eng J, Aebersold R. Ranish JA, et al. Nat Genet. 2003 Mar;33(3):349-55. doi: 10.1038/ng1101. Epub 2003 Feb 18. Nat Genet. 2003. PMID: 12590263

8

Quantitative proteomic analysis indicates increased synthesis of a quinolone by Pseudomonas aeruginosa isolates from cystic fibrosis airways.

Guina T, Purvine SO, Yi EC, Eng J, Goodlett DR, Aebersold R, Miller SI. Guina T, et al. Proc Natl Acad Sci U S A. 2003 Mar 4;100(5):2771-6. doi: 10.1073/pnas.0435846100. Epub 2003 Feb 24. Proc Natl Acad Sci U S A. 2003. PMID: 12601166 Free PMC article.

9

Proteome analysis of low-abundance proteins using multidimensional chromatography and isotope-coded affinity tags.

Gygi SP, Rist B, Griffin TJ, Eng J, Aebersold R. Gygi SP, et al. J Proteome Res. 2002 Jan-Feb;1(1):47-54. doi: 10.1021/pr015509n. J Proteome Res. 2002. PMID: 12643526

10

The application of new software tools to quantitative protein profiling via isotope-coded affinity tag (ICAT) and tandem mass spectrometry: I. Statistically annotated datasets for peptide sequences and proteins identified via the application of ICAT and tandem mass spectrometry to proteins copurifying with T cell lipid rafts.

von Haller PD, Yi E, Donohoe S, Vaughn K, Keller A, Nesvizhskii AI, Eng J, Li XJ, Goodlett DR, Aebersold R, Watts JD. von Haller PD, et al. Mol Cell Proteomics. 2003 Jul;2(7):426-7. doi: 10.1074/mcp.D300002-MCP200. Epub 2003 Jun 25. Mol Cell Proteomics. 2003. PMID: 12832456 Free article.

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