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Genome of alkaliphilic Bacillus pseudofirmus OF4 reveals adaptations that support the ability to grow in an external pH range from 7.5 to 11.4.
Janto B, Ahmed A, Ito M, Liu J, Hicks DB, Pagni S, Fackelmayer OJ, Smith TA, Earl J, Elbourne LD, Hassan K, Paulsen IT, Kolstø AB, Tourasse NJ, Ehrlich GD, Boissy R, Ivey DM, Li G, Xue Y, Ma Y, Hu FZ, Krulwich TA. Janto B, et al. Among authors: ahmed a. Environ Microbiol. 2011 Dec;13(12):3289-309. doi: 10.1111/j.1462-2920.2011.02591.x. Epub 2011 Sep 27. Environ Microbiol. 2011. PMID: 21951522 Free PMC article.
Identification, distribution, and expression of novel genes in 10 clinical isolates of nontypeable Haemophilus influenzae.
Shen K, Antalis P, Gladitz J, Sayeed S, Ahmed A, Yu S, Hayes J, Johnson S, Dice B, Dopico R, Keefe R, Janto B, Chong W, Goodwin J, Wadowsky RM, Erdos G, Post JC, Ehrlich GD, Hu FZ. Shen K, et al. Among authors: ahmed a. Infect Immun. 2005 Jun;73(6):3479-91. doi: 10.1128/IAI.73.6.3479-3491.2005. Infect Immun. 2005. PMID: 15908377 Free PMC article.
Characterization, distribution, and expression of novel genes among eight clinical isolates of Streptococcus pneumoniae.
Shen K, Gladitz J, Antalis P, Dice B, Janto B, Keefe R, Hayes J, Ahmed A, Dopico R, Ehrlich N, Jocz J, Kropp L, Yu S, Nistico L, Greenberg DP, Barbadora K, Preston RA, Post JC, Ehrlich GD, Hu FZ. Shen K, et al. Among authors: ahmed a. Infect Immun. 2006 Jan;74(1):321-30. doi: 10.1128/IAI.74.1.321-330.2006. Infect Immun. 2006. PMID: 16368987 Free PMC article.
Construction and characterization of a highly redundant Pseudomonas aeruginosa genomic library prepared from 12 clinical isolates: application to studies of gene distribution among populations.
Erdos G, Sayeed S, Hu FZ, Antalis PT, Shen K, Hayes JD, Ahmed AI, Johnson SL, Post JC, Ehrlich GD. Erdos G, et al. Int J Pediatr Otorhinolaryngol. 2006 Nov;70(11):1891-900. doi: 10.1016/j.ijporl.2006.06.016. Epub 2006 Aug 8. Int J Pediatr Otorhinolaryngol. 2006. PMID: 16899304 Free PMC article.
Extensive genomic plasticity in Pseudomonas aeruginosa revealed by identification and distribution studies of novel genes among clinical isolates.
Shen K, Sayeed S, Antalis P, Gladitz J, Ahmed A, Dice B, Janto B, Dopico R, Keefe R, Hayes J, Johnson S, Yu S, Ehrlich N, Jocz J, Kropp L, Wong R, Wadowsky RM, Slifkin M, Preston RA, Erdos G, Post JC, Ehrlich GD, Hu FZ. Shen K, et al. Among authors: ahmed a. Infect Immun. 2006 Sep;74(9):5272-83. doi: 10.1128/IAI.00546-06. Infect Immun. 2006. PMID: 16926421 Free PMC article.
Generation of genic diversity among Streptococcus pneumoniae strains via horizontal gene transfer during a chronic polyclonal pediatric infection.
Hiller NL, Ahmed A, Powell E, Martin DP, Eutsey R, Earl J, Janto B, Boissy RJ, Hogg J, Barbadora K, Sampath R, Lonergan S, Post JC, Hu FZ, Ehrlich GD. Hiller NL, et al. Among authors: ahmed a. PLoS Pathog. 2010 Sep 16;6(9):e1001108. doi: 10.1371/journal.ppat.1001108. PLoS Pathog. 2010. PMID: 20862314 Free PMC article.
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