Skip to main page content
U.S. flag

An official website of the United States government

Dot gov

The .gov means it’s official.
Federal government websites often end in .gov or .mil. Before sharing sensitive information, make sure you’re on a federal government site.

Https

The site is secure.
The https:// ensures that you are connecting to the official website and that any information you provide is encrypted and transmitted securely.

Access keys NCBI Homepage MyNCBI Homepage Main Content Main Navigation

Search Page

Filters

My Custom Filters

Publication date

Text availability

Article attribute

Article type

Additional filters

Article Language

Species

Sex

Age

Other

Search Results

250 results

Filters applied: . Clear all
Results are displayed in a computed author sort order. The Publication Date timeline is not available.
Page 1
Automatic rebuilding and optimization of crystallographic structures in the Protein Data Bank.
Joosten RP, Joosten K, Cohen SX, Vriend G, Perrakis A. Joosten RP, et al. Among authors: perrakis a. Bioinformatics. 2011 Dec 15;27(24):3392-8. doi: 10.1093/bioinformatics/btr590. Epub 2011 Oct 27. Bioinformatics. 2011. PMID: 22034521 Free PMC article.
MOTIVATION: Macromolecular crystal structures in the Protein Data Bank (PDB) are a key source of structural insight into biological processes. These structures, some >30 years old, were constructed with methods of their era. ...CONTACT: [email protected]; a.per …
MOTIVATION: Macromolecular crystal structures in the Protein Data Bank (PDB) are a key source of structural insight into biological p …
Breaking good resolutions with ARP/wARP.
Morris RJ, Zwart PH, Cohen S, Fernandez FJ, Kakaris M, Kirillova O, Vonrhein C, Perrakis A, Lamzin VS. Morris RJ, et al. Among authors: perrakis a. J Synchrotron Radiat. 2004 Jan 1;11(Pt 1):56-9. doi: 10.1107/s090904950302394x. Epub 2003 Nov 28. J Synchrotron Radiat. 2004. PMID: 14646134
Towards complete validated models in the next generation of ARP/wARP.
Cohen SX, Morris RJ, Fernandez FJ, Ben Jelloul M, Kakaris M, Parthasarathy V, Lamzin VS, Kleywegt GJ, Perrakis A. Cohen SX, et al. Among authors: perrakis a. Acta Crystallogr D Biol Crystallogr. 2004 Dec;60(Pt 12 Pt 1):2222-9. doi: 10.1107/S0907444904027556. Epub 2004 Nov 26. Acta Crystallogr D Biol Crystallogr. 2004. PMID: 15572775
Developments in the CCP4 molecular-graphics project.
Potterton L, McNicholas S, Krissinel E, Gruber J, Cowtan K, Emsley P, Murshudov GN, Cohen S, Perrakis A, Noble M. Potterton L, et al. Among authors: perrakis a. Acta Crystallogr D Biol Crystallogr. 2004 Dec;60(Pt 12 Pt 1):2288-94. doi: 10.1107/S0907444904023716. Epub 2004 Nov 26. Acta Crystallogr D Biol Crystallogr. 2004. PMID: 15572783
SPINE workshop on automated X-ray analysis: a progress report.
Bahar M, Ballard C, Cohen SX, Cowtan KD, Dodson EJ, Emsley P, Esnouf RM, Keegan R, Lamzin V, Langer G, Levdikov V, Long F, Meier C, Muller A, Murshudov GN, Perrakis A, Siebold C, Stein N, Turkenburg MG, Vagin AA, Winn M, Winter G, Wilson KS. Bahar M, et al. Among authors: perrakis a. Acta Crystallogr D Biol Crystallogr. 2006 Oct;62(Pt 10):1170-83. doi: 10.1107/S0907444906032197. Epub 2006 Sep 19. Acta Crystallogr D Biol Crystallogr. 2006. PMID: 17001094 Review.
SPINE bioinformatics and data-management aspects of high-throughput structural biology.
Albeck S, Alzari P, Andreini C, Banci L, Berry IM, Bertini I, Cambillau C, Canard B, Carter L, Cohen SX, Diprose JM, Dym O, Esnouf RM, Felder C, Ferron F, Guillemot F, Hamer R, Ben Jelloul M, Laskowski RA, Laurent T, Longhi S, Lopez R, Luchinat C, Malet H, Mochel T, Morris RJ, Moulinier L, Oinn T, Pajon A, Peleg Y, Perrakis A, Poch O, Prilusky J, Rachedi A, Ripp R, Rosato A, Silman I, Stuart DI, Sussman JL, Thierry JC, Thompson JD, Thornton JM, Unger T, Vaughan B, Vranken W, Watson JD, Whamond G, Henrick K. Albeck S, et al. Among authors: perrakis a. Acta Crystallogr D Biol Crystallogr. 2006 Oct;62(Pt 10):1184-95. doi: 10.1107/S090744490602991X. Epub 2006 Sep 19. Acta Crystallogr D Biol Crystallogr. 2006. PMID: 17001095 Free PMC article. Review.
Co-expression of protein complexes in prokaryotic and eukaryotic hosts: experimental procedures, database tracking and case studies.
Romier C, Ben Jelloul M, Albeck S, Buchwald G, Busso D, Celie PH, Christodoulou E, De Marco V, van Gerwen S, Knipscheer P, Lebbink JH, Notenboom V, Poterszman A, Rochel N, Cohen SX, Unger T, Sussman JL, Moras D, Sixma TK, Perrakis A. Romier C, et al. Among authors: perrakis a. Acta Crystallogr D Biol Crystallogr. 2006 Oct;62(Pt 10):1232-42. doi: 10.1107/S0907444906031003. Epub 2006 Sep 19. Acta Crystallogr D Biol Crystallogr. 2006. PMID: 17001100
ARP/wARP and molecular replacement: the next generation.
Cohen SX, Ben Jelloul M, Long F, Vagin A, Knipscheer P, Lebbink J, Sixma TK, Lamzin VS, Murshudov GN, Perrakis A. Cohen SX, et al. Among authors: perrakis a. Acta Crystallogr D Biol Crystallogr. 2008 Jan;64(Pt 1):49-60. doi: 10.1107/S0907444907047580. Epub 2007 Dec 5. Acta Crystallogr D Biol Crystallogr. 2008. PMID: 18094467 Free PMC article.
A knowledge-driven approach for crystallographic protein model completion.
Joosten K, Cohen SX, Emsley P, Mooij W, Lamzin VS, Perrakis A. Joosten K, et al. Among authors: perrakis a. Acta Crystallogr D Biol Crystallogr. 2008 Apr;64(Pt 4):416-24. doi: 10.1107/S0907444908001558. Epub 2008 Mar 19. Acta Crystallogr D Biol Crystallogr. 2008. PMID: 18391408 Free PMC article.
250 results