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ARSyN: a method for the identification and removal of systematic noise in multifactorial time course microarray experiments.
Nueda MJ, Ferrer A, Conesa A. Nueda MJ, et al. Biostatistics. 2012 Jul;13(3):553-66. doi: 10.1093/biostatistics/kxr042. Epub 2011 Nov 14. Biostatistics. 2012. PMID: 22085896
Software for ARSyN is freely available at http://www.ua.es/personal/mj.nueda....
Software for ARSyN is freely available at http://www.ua.es/personal/mj.nueda....
High-throughput functional annotation and data mining with the Blast2GO suite.
Götz S, García-Gómez JM, Terol J, Williams TD, Nagaraj SH, Nueda MJ, Robles M, Talón M, Dopazo J, Conesa A. Götz S, et al. Among authors: nueda mj. Nucleic Acids Res. 2008 Jun;36(10):3420-35. doi: 10.1093/nar/gkn176. Epub 2008 Apr 29. Nucleic Acids Res. 2008. PMID: 18445632 Free PMC article.
Functional assessment of time course microarray data.
Nueda MJ, Sebastián P, Tarazona S, García-García F, Dopazo J, Ferrer A, Conesa A. Nueda MJ, et al. BMC Bioinformatics. 2009 Jun 16;10 Suppl 6(Suppl 6):S9. doi: 10.1186/1471-2105-10-S6-S9. BMC Bioinformatics. 2009. PMID: 19534758 Free PMC article.
Pathway network inference from gene expression data.
Ponzoni I, Nueda M, Tarazona S, Götz S, Montaner D, Dussaut J, Dopazo J, Conesa A. Ponzoni I, et al. BMC Syst Biol. 2014;8 Suppl 2(Suppl 2):S7. doi: 10.1186/1752-0509-8-S2-S7. Epub 2014 Mar 13. BMC Syst Biol. 2014. PMID: 25032889 Free PMC article.
17 results